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Update to 0.6.0 #192
Update to 0.6.0 #192
Commits on Apr 12, 2023
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As this is no longer needed to download the executables
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make surface water methods more robust
add_stages_from_waterboards and add_bottom_height_from_waterboards
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Commits on Apr 14, 2023
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Commits on Apr 17, 2023
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Add information about webservices Rijn en IJssel
And improve handling of columns
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Commits on Apr 18, 2023
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Commits on May 1, 2023
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- get_structured_grid_ds: create a structured grid DataSet - get_vertex_grid_ds: create a vertex grid Dataset
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- allow creation of datasets based on flopy modelgrid objects - supports both vertex and structured grid
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- update RTD workflow - update CI workflow - remove setup.py - move shape data
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Commits on May 2, 2023
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fix reading ascii file header if key is not in header
fix #171 header reading is now fine if not all ascii keys: "ncols", "nrows", "nodata_value", "xllcorner", "yllcorner", "cellsize", "xllcenter", "yllcenter", are in the header
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Commits on May 3, 2023
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Commits on May 8, 2023
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- add gridtype attr - improve reading grids at real-world coords - set delr/delc for structured grids
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* Add option to only use most common station Slow determination of stations (locations.geo.get_nearest_point) is removed * solve minor bug and add test for most_common_station=True * Set gridgen files in a separate directory. Solves issue #158 * minor changes * Make most_common_station work with structured grids as well * Create gridgen directory when it does not exist * Solve fiona.errors.DriverError: not recognized as a supported file format. * Remove rasterstats as a dependency for tests and docs * Codacy stuff
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* Add option to only use most common station Slow determination of stations (locations.geo.get_nearest_point) is removed * solve minor bug and add test for most_common_station=True * Set gridgen files in a separate directory. Solves issue #158 * minor changes * Make most_common_station work with structured grids as well * Create gridgen directory when it does not exist * Solve fiona.errors.DriverError: not recognized as a supported file format. * Remove rasterstats as a dependency for tests and docs * Codacy stuff
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Commits on May 9, 2023
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Merge pull request #169 from ArtesiaWater/ds_from_modelgrids
Create nlmod Datasets from flopy modelgrids
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- get_structured_grid_ds: create a structured grid DataSet - get_vertex_grid_ds: create a vertex grid Dataset
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- allow creation of datasets based on flopy modelgrid objects - supports both vertex and structured grid
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- add gridtype attr - improve reading grids at real-world coords - set delr/delc for structured grids
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fix reading ascii file header if key is not in header
fix #171 header reading is now fine if not all ascii keys: "ncols", "nrows", "nodata_value", "xllcorner", "yllcorner", "cellsize", "xllcenter", "yllcenter", are in the header
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* Add option to only use most common station Slow determination of stations (locations.geo.get_nearest_point) is removed * solve minor bug and add test for most_common_station=True * Set gridgen files in a separate directory. Solves issue #158 * minor changes * Make most_common_station work with structured grids as well * Create gridgen directory when it does not exist * Solve fiona.errors.DriverError: not recognized as a supported file format. * Remove rasterstats as a dependency for tests and docs * Codacy stuff
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* Add option to only use most common station Slow determination of stations (locations.geo.get_nearest_point) is removed * solve minor bug and add test for most_common_station=True * Set gridgen files in a separate directory. Solves issue #158 * minor changes * Make most_common_station work with structured grids as well * Create gridgen directory when it does not exist * Solve fiona.errors.DriverError: not recognized as a supported file format. * Remove rasterstats as a dependency for tests and docs * Codacy stuff
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Commits on May 10, 2023
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Merge pull request #170 from ArtesiaWater/pyproject_toml2
Move to pyproject.toml
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- make _get_*_grid_ds functions internal - move all vertex grid logic into function - users should use modelgrid_to_ds() - make tight_layout optional, as this does not work nicely with animations
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Commits on May 11, 2023
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Commits on May 12, 2023
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Merge pull request #176 from ArtesiaWater/animate
Add animate function
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Use the provisonal version of modpath (#177)
* Use the provisonal version of modpath * Put modpath files in its own directory * fix modpath notebook warnings and codacy issue * Fix rtd requirements * make sure geocube is in requirements rtd * Fix spelling error: provisonal -> provisional * make mp7_provisional executable * don't need adjustment of file paths? * add back file location check * add modpath excecutable to setuptools.package-data * Fix sphinx_rtd_theme, so menu button functions again --------- Co-authored-by: dbrakenhoff <d.brakenhoff@artesia-water.nl>
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Commits on May 13, 2023
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Commits on May 15, 2023
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add improved plotting submodule
- move plot.py - add flopy plotting module (plot/flopy.py) - move all flopy style plotting into flopy.py - move plotting util functions to plotutil.py - add init
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Merge pull request #178 from ArtesiaWater/time-coord-outputs
Improve getting time coordinates from groundwater model objects
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Merge pull request #179 from ArtesiaWater/improve-plotting
Improve plotting
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Commits on May 23, 2023
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Commits on May 24, 2023
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Minor bug prevents using meteobase <py3.9
This "|" operator is not supported in Python 3.8.
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Commits on May 25, 2023
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add functions to obtain time index for xarray
- from model - from model.modeltime - from array of elapsed time
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- build time index from output times - add support for non constant delr/delc - improve support for angrot
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- ensure no wells added in inactive cells - improve handling of aux variable
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- add support for rotation argument - add extent kwarg - add date_fmt for plot title - add alpha
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make meteobase changes a bit more robust
only use metadata if available check if CRS is actually RD new only replace nans if specified
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Merge pull request #182 from ArtesiaWater/meteobase
Small fixes to Meteobase
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Commits on May 26, 2023
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Reading data from KNMI Data Platform (#166)
* Add first methods to get data from knmi data platform * Improve knmi_data_platform * from this day onward, I pledge to use type hints when making new functions * minor change to make os.path.isdir work * Read multiple files at once and add tests * create method to get api_key * Update knmi_data_platform.py add two type hints and move some arguments * add h5netcdf as dependency needed for reading knmi_data_platform files * add functions to read hdf5 files - also reformats the read_dataset_from_zip - add a function to read_nc_knmi * update read_h5 and read_nc functions * add read_grib_knmi function * Update knmi_data_platform.py fix some handling with ZipFile * update reading h5 file only open h5file when reading contents, also fix bug with getting h5Dataset * isort * Update knmi_data_platform.py add check_hour function that handles hour=24 * don't provide engine when reading netcdf * Update knmi_data_platform.py remove reading from download function * Update knmi_data_platform.py some renaming * Delete HA40_N55_202304130000_00600_GB * Update knmi_data_platform.py remove _knmi from function names read dataset now also supports a list of fnames * Update test_018_knmi_data_platform.py * Create KNMI_Data_Platform_GRIB.tar * Create KNMI_Data_Platform_H5.zip * move hour check to read_dataset * Update knmi_data_platform.py fix download_files function * full install in ci * resolve merge conflicts setup.py? * add dependencies for knmi_data_platform * seperate download and file reading file reading took too long * upload correct dataset * fix codacy stuff and add simple docstring - add timeout to request.get - better exceptions - add docstring - {} instead of dict()? - nog wat ander gejank * fix meta update bug --------- Co-authored-by: Ruben Caljé <r.calje@artesia-water.nl>
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depedencies for knmi_data_platform backend using hdf5 files are now optional
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Commits on Jun 2, 2023
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- get_heads_dataarray - get_heads_array
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- create mfoutput.py with generic _get_output_da function - apply new function in - get_heads_da - get_conc_da - get_budget_da
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Commits on Jun 3, 2023
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Commits on Jun 5, 2023
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Merge pull request #183 from ArtesiaWater/nhzz
Several improvements from NH zoet/zout project
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Commits on Jun 6, 2023
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* Flip meteobase data and bug in loading data * Default to replacing nodata values with nan * Meteobase: Remove nodata value from attributes when converting nodata to nan * move flipping when interpreting y instead of reading ascii * formatting --------- Co-authored-by: Martin Vonk <vonk.mart@gmail.com> Bas des Tombe
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Commits on Jun 7, 2023
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Deprecate nlmod facet plot method (#189)
* use xarray facet plot in nb * use xarray facet plot in nb
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* fix for #186 * Update 00_model_from_scratch.ipynb --------- Co-authored-by: Ruben Caljé <r.calje@artesia-water.nl>
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Handling data when building flopy packages from model dataset (#188)
* improve data variable handling: - use _get_value_from_ds_attr and _get_value_from_data_var - deprecation warning for ghb/drn `da_name=` kwarg - rename 'chd' arg to 'mask' (with deprecationwarning) * move _get_value_from_ds_* funcs to util * move _get_value_from_ds_* funcs to util * rename "_peil" to "_stage" data var for rws data * line length * shorten func names - since we use ds as a common abbreviation for dataset * add tests for _get_value_from_ds_* * update notebooks * update tests * isort * fix import * codacy * Remove da_name from nlmod.gwf.ghb in transport-notebook --------- Co-authored-by: Ruben Caljé <r.calje@artesia-water.nl>
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* add test for lake * add evaporation to test * update docstring * add extra test and some fixes to lake from_gdf * Add a TODO to check for a length unit --------- Co-authored-by: Ruben Caljé <r.calje@artesia-water.nl>
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