Issue 2

Timeline issues - running into problems with Artimes.

PbjJmsSender tries to connect to the broker it can't. (broker doesn't generate logs) It does generate logs if you start the broker manually from the command line

Pip is no longer properly installing the dependencies for any of the source Python packages in the code (ctakes_pbj_py)

SOLUTION:

• Check pom to see if py is == 3.8

• SET ENV JAVA_HOME /usr/lib/jvm/java

This solution still requires that you start the Artemis broker manually to get things running, but inside the Docker it works by itself.

Collection_process_complete ERROR

03 Jan 2024 17:22:03  INFO timelines_pipeline - Wed Jan  3 17:22:03 2024 Malformed Message:
03 Jan 2024 17:22:03  INFO timelines_pipeline -  
2024-01-03 17:22:03,623 WARN  [org.apache.activemq.artemis.core.protocol.stomp] AMQ332069: Sent ERROR frame to STOMP client /127.0.0.1:38520: readAddress(..) failed: Connection reset by peer
2024-01-03 17:22:03,623 WARN  [org.apache.activemq.artemis.core.server] AMQ222067: Connection failure has been detected: readAddress(..) failed: Connection reset by peer [code=GENERIC_EXCEPTION]
2024-01-03 17:22:03,623 WARN  [org.apache.activemq.artemis.core.server] AMQ222061: Client connection failed, clearing up resources for session 83f2efb9-aa86-11ee-a3e4-00be438a9d50
2024-01-03 17:22:03,623 WARN  [org.apache.activemq.artemis.core.server] AMQ222107: Cleared up resources for session 83f2efb9-aa86-11ee-a3e4-00be438a9d50