This is the source code for the Harmony project REST API
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Updated
Aug 26, 2024 - Python
This is the source code for the Harmony project REST API
Python library for intelligent data stewardship using Large Language Model (LLM) embeddings
Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization
A python framework for data mining microbial natural products by integrating genomics and metabolomics data
The Harmony Python library: a research tool for psychologists to harmonise data and questionnaire items. Open source.
Blog for NLP data harmonisation project Harmony, open source solution using Python for psychologists
Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure
This is the DataHarmonizer spreadsheet web application bundled with pathogen genomics data entry and validation templates
Code and sample data for McGregor et al., 2024
Graphics for the article "Methods used in the development of Common Data Models for health data – a Scoping Review"
AD & PD cohort variable distributions
Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects
Visualizing demographic evolution using geographically inconsistent census data
Miscellaneous codes for harmonizing agricultural output and other agri-related data raster files and shapefiles. Extracts from raster files the grid-cell data by shapefile boundary.
Miscellaneous codes for spatial mapping and raster data manipulation
Proof-of-concept for storing and querying harmonized AMR Genomic Analysis Results in datahike
NES
International Physical Activity Questionnaire (IPAQ) variables
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