A shinyapp for performing GWAS in rapeseed based on a core collection
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Updated
Oct 30, 2020 - R
A shinyapp for performing GWAS in rapeseed based on a core collection
RHAPSODY WP3 Pre-Diabetes analysis script
A web service to upload and share GWAS results with LocusZoom.js
We suggest a novel way of defining NCD as a continuous phenotype, and we employ a mixed linear model to account for pronounced population stratification in the South Asian sample, which is more diverse than European samples, for example.
Code repo for research project with Dr. Gissette Soffer and Dr. Badri Vardarajan at Columbia Medical Center
DRAGGER: Drug Repositioning by Analysis of GWAS and Gene Expression in R (maintained version). For publication version, see https://github.com/AEstebanMar/DAGGER-publication
A simple GWAS parser + CLI
A pipeline to predict risk genes, implicated cell types and drugs for repurposing based on known risk genes (derived from GWAS) for complex traits.
GWAS Pre-Processing Pipeline
Analysis code and processing stages for Genome-Wide meta-analysis of low grip strength in older people.
multiple imputation for association studies
A pipeline for GEM And GWAS Automation
GWAS analysis process based on EMMAX software
Tool for genome wide association studies with Bayesian inference and statistical learning
Genetic correlation calculation pipeline via summary statistics for PheWeb
Make interactive LocusZoom plots from a local GWAS file
From QC to summary statistics
GWAS summary statistics files QC tool
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