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  1. clinical_variant_database clinical_variant_database Public

    Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioi…

    Ruby 10 2

  2. variant_parser variant_parser Public

    Selects possible pathogenic variants from an Alamut output

    Ruby 1

  3. targeted_sequencing_pipeline targeted_sequencing_pipeline Public

    Targeted sequencing pipeline for the Royal Devon & Exeter Molecular Genetics lab.

    HTML 1

  4. mosaic_clusterer mosaic_clusterer Public

    Uses SciKit Learn library's Mean Shift implementation to draw a chart of mosaic variants

    Python

  5. virtual_parser virtual_parser Public

    Virtual panel parser with ruleset for pathogenic variants, for use with Cellbase annotated variants

    Clojure

  6. gw_meta_analysis_low_muscle_strength gw_meta_analysis_low_muscle_strength Public archive

    Analysis code and processing stages for Genome-Wide meta-analysis of low grip strength in older people.

    R 5