GitHub - AEstebanMar/DAGGER-publication: DAGGER: Drug repositioning by Analysis of GWAS and Gene Expression in R (publication version). For maintained version, see https://github.com/AEstebanMar/DRAGGER

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DAGGER: Drug repositioning by Analysis of GWAS and Gene Expression in R (publication version). For maintained version, see https://github.com/AEstebanMar/DRAGGER

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GNU/Linux 4.4.0 distribution Ubuntu 20.04.3 LTS
R version 4.2.1

Required R packages: stringr, ggplot2

Input data (place in data/raw):

	GTEx dataset available at https://www.gtexportal.org/home/datasets (version consulted in publication: GTEx_Analysis_v8_eQTL.tar)

	GWAS dataset kindly provided by Bellenguez et al, 2022.

	Drug interaction data available at https://www.dgidb.org/downloads

	Alzforum database: https://www.alzforum.org/therapeutics/search?fda_statuses=&target_types=&therapy_types=&conditions=&keywords-entry=&keywords=#results

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DAGGER: Drug repositioning by Analysis of GWAS and Gene Expression in R (publication version). For maintained version, see https://github.com/AEstebanMar/DRAGGER

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