An R-shiny package to analyse and visualise fungal gene expression data
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Updated
Mar 14, 2024 - R
An R-shiny package to analyse and visualise fungal gene expression data
Code to reproduce analyses of mouse cortical gradients
Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas
Agglomerative based clustering on gene expression dataset
Fit your oversized data.frame to your console width.
DPre is a bioinformatic tool that enables the user to explore cell type conversion/ differentiation experiments. DPre may take the expression or the differentially regulated genes of the samples to rate transcriptional similarity with a reference dataset, the targets.
A biclustering library with datasets, evaluation measures and a benchmarking framework
The Cancer Genome Atlas datbase | Cancer Classification | Deep Learning | CNN
An interactive Streamlit app for processing and visualizing GEO data from NCBI's Gene Expression Omnibus.
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
Predict the samplesizes for certain errorrates for statistical classifiers
This is the R code to extract Gene Expression Profiles of particular genes from GEO (Gene Expression Omnibus) datasets.
Metabolic subtyping of tumors from gene expression data
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
Implementation code for evaluating COMET approach on various simulation datasets
Repository of my internship in the RDDS lab of the University of Trento
PCA: Exploring transcriptome-wide changes using python (pandas/scikit-learn/matplotlib) 🧬 💻 👩🔬 🖥️
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