test for make reproj imgs #179
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| # Continuous integration | |
| name: CI | |
| on: | |
| push: | |
| paths: | |
| - "sleap_anipose/**" | |
| - "tests/**" | |
| - ".github/workflows/ci.yml" | |
| - "environment.yml" | |
| - "setup.cfg" | |
| jobs: | |
| # Tests with pytest | |
| tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-22.04", "windows-2022"] | |
| python: [3.8] | |
| name: Tests (${{ matrix.os }}, Python ${{ matrix.python }}) | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3.0.2 | |
| - name: Cache conda | |
| uses: actions/cache@v1 | |
| env: | |
| # Increase this value to reset cache if environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('environment.yml', 'setup.cfg') }} | |
| - name: Setup Miniconda | |
| # https://github.com/conda-incubator/setup-miniconda | |
| uses: conda-incubator/setup-miniconda@v2.1.1 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| environment-file: environment.yml | |
| activate-environment: sleap-anipose | |
| - name: Print environment info | |
| shell: bash -l {0} | |
| run: | | |
| which python | |
| conda info | |
| conda list | |
| - name: Test with pytest | |
| if: ${{ !(startsWith(matrix.os, 'ubuntu') && matrix.python == 3.8) }} | |
| shell: bash -l {0} | |
| run: | | |
| pytest | |
| - name: Test with pytest (with coverage) | |
| if: ${{ startsWith(matrix.os, 'ubuntu') && matrix.python == 3.8 }} | |
| shell: bash -l {0} | |
| run: | | |
| pytest --cov=sleap_anipose --cov-report=xml tests/ | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v3 | |
| if: ${{ startsWith(matrix.os, 'ubuntu') && matrix.python == 3.8 }} | |
| with: | |
| fail_ci_if_error: true | |
| verbose: false |