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428 Open 1,315 Closed
428 Open 1,315 Closed
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Issues list

[FEATURE] Update BAMTOFASTQ10X for multiplexed samples
#6725 opened Oct 2, 2024 by herpov
1
new module: qdnaseq/run new module Adding a new module
#6724 opened Oct 2, 2024 by lbeltrame
4 tasks done
@lbeltrame
1
new module: ascatsc/run new module Adding a new module
#6723 opened Oct 2, 2024 by lbeltrame
4 tasks done
@lbeltrame
new module: jvarkit/sam2tsv new module Adding a new module
#6719 opened Oct 1, 2024 by lmfaber
4 tasks done
new module: BCFTOOLS/PLUGINSETGT new module Adding a new module
#6717 opened Sep 30, 2024 by eweizy
4 tasks done
1
@eweizy
nf-core install could not detect work dir bug Something isn't working
#6708 opened Sep 29, 2024 by an-altosian
2 tasks done
new module: seqkit/translate new module Adding a new module
#6705 opened Sep 27, 2024 by delfiterradas
4 tasks done
@delfiterradas
new module: MICROSAM new module Adding a new module
#6703 opened Sep 27, 2024 by kbestak
4 tasks done
@kbestak
[FEATURE] Bulk update modules to use Seqera Containers
#6698 opened Sep 26, 2024 by ewels
versions.yml-generating code produce malformed files without the nf-module failing bug Something isn't working
#6696 opened Sep 26, 2024 by asp8200
2 tasks done
1
[FEATURE] Build automation for fetching Seqera Containers enhancement New feature or request
#6694 opened Sep 26, 2024 by ewels
1
[FEATURE] bbmap/align control output better
#6689 opened Sep 25, 2024 by njohner
new module: irescue new module Adding a new module
#6686 opened Sep 24, 2024 by bepoli
4 tasks done
1
@bepoli
Caused by: java.nio.channels.OverlappingFileLockException bug Something isn't working
#6664 opened Sep 18, 2024 by edmundmiller
1
7
Update output to use type dir
#6650 opened Sep 16, 2024 by mirpedrol
Tests don't run for template updates bug Something isn't working
#6640 opened Sep 13, 2024 by pinin4fjords
2 tasks done
RTGtools missing in modules happy/happy bug Something isn't working
#6637 opened Sep 13, 2024 by melferink
2 tasks done
1
@Jorisvansteenbrugge
Improve module specific resource requests
#6629 opened Sep 11, 2024 by edmundmiller
2
new module: add microbial reference genomes to Sarek new module Adding a new module
#6611 opened Sep 6, 2024 by ybdong919
@ybdong919
nf-test failure: subworkflow BAM_VARIANT_DEMIX_BOOT_FREYJA bug Something isn't working
#6607 opened Sep 6, 2024 by ewels
new module: motus/prep_long new module Adding a new module
#6589 opened Sep 5, 2024 by sofstam
3 of 4 tasks
1
new module: HMMER/TIDY new module Adding a new module
#6557 opened Sep 5, 2024 by jen-reeve
4 tasks done
@jen-reeve
new module: shigapass new module Adding a new module
#6548 opened Sep 4, 2024 by maxlcummins
4 tasks done
Snapshot content of version files instead of a hash
#6505 opened Aug 30, 2024 by edmundmiller
@maxulysse
7
Add renovate comments to environment.yml
#6504 opened Aug 30, 2024 by edmundmiller Renovate Version Update Automation
@edmundmiller
2
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