The graphical abstract
If you use this work in published research, please cite:
Shuangbin Xu, Li Zhan, Wenli Tang, Qianwen Wang, Zehan Dai, Lang Zhou, Tingze Feng, Meijun Chen, Tianzhi Wu, Erqiang Hu, Guangchuang Yu*. MicrobiotaProcess: A comprehensive R package for deep mining microbiome. The Innovation. 2023, 4(2):100388. doi: 10.1016/j.xinn.2023.100388.
This repo contains source code and data to produce Supplementary Material of the above paper.
To compile the supplementary_file_A.pdf and supplementary_file_B.pdf, please run the following command in R:
rmarkdown::render("supplementary_file_A.Rmd")
rmarkdown::render("supplementary_file_B.Rmd")
Here is the output of sessioninfo::session_info() on the system on
which this
document
was compiled:
## ─ Session info ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
## setting value
## version R version 4.2.0 (2022-04-22)
## os Ubuntu 18.04.4 LTS
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate en_US.UTF-8
## ctype en_US.UTF-8
## tz Asia/Shanghai
## date 2023-02-08
## pandoc 2.9.2 @ /usr/bin/ (via rmarkdown)
##
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