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@EmbryoPhenomics

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  1. EmbryoPhenomics/dev-resnet EmbryoPhenomics/dev-resnet Public

    3D ConvNet for automating the detection of developmental events. Weights, training and inference scripts are included.

    Jupyter Notebook 1

  2. convnext-v2_tensorflow convnext-v2_tensorflow Public

    Tensorflow implementations of ConvNeXt V1 + V2 models w/ weights, including conversion and evaluation scripts.

    Python 7 1

  3. EmbryoPhenomics/heartcv EmbryoPhenomics/heartcv Public

    Software for automated quantification of cardiac traits from video of transparent animals.

    Python 1

  4. EmbryoPhenomics/embryo_segmentation EmbryoPhenomics/embryo_segmentation Public

    Models, weights and scripts for semantic segmentation of embryos in microscopy images. Including popular CNNs such as UNet, PSPnet and DeepLabV3.

    Python 2

  5. tidedashboard tidedashboard Public

    Dashboard for viewing tide data interactively, made with Shiny, R.

    R 2

  6. EmbryoPhenomics/vuba EmbryoPhenomics/vuba Public

    An easy to use library for constructing OpenCV HighGUI interfaces.

    Python 3