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apacheGH-38183: [CI][Python] Use pipx to install GCS testbench (apach…
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…e#43852)

### Rationale for this change

Installing the GCS testbench using the same Python that's being used to test PyArrow is fragile: some testbench versions may not be compatible, or there could be conflicts among the dependencies of the respective libraries.

### What changes are included in this PR?

Use `pipx` to install the GCS testbench in a separate, controlled environment, using an appropriate Python version.

### Are these changes tested?

Yes, by CI.

### Are there any user-facing changes?

No.

* GitHub Issue: apache#38183

Authored-by: Antoine Pitrou <antoine@python.org>
Signed-off-by: Sutou Kouhei <kou@clear-code.com>
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pitrou authored Aug 29, 2024
1 parent 0bc91dd commit 58415d1
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8 changes: 5 additions & 3 deletions .github/workflows/cpp.yml
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Expand Up @@ -465,15 +465,17 @@ jobs:
chmod +x /usr/local/bin/minio.exe
- name: Set up Python
uses: actions/setup-python@v5.1.1
id: python-install
with:
python-version: 3.9
- name: Install Google Cloud Storage Testbench
shell: bash
shell: msys2 {0}
env:
PIPX_BIN_DIR: /usr/local/bin
PIPX_PYTHON: ${{ steps.python-install.outputs.python-path }}
run: |
ci/scripts/install_gcs_testbench.sh default
echo "PYTHON_BIN_DIR=$(cygpath --windows $(dirname $(which python3.exe)))" >> $GITHUB_ENV
- name: Test
shell: msys2 {0}
run: |
PATH="$(cygpath --unix ${PYTHON_BIN_DIR}):${PATH}"
ci/scripts/cpp_test.sh "$(pwd)" "$(pwd)/build"
1 change: 1 addition & 0 deletions appveyor.yml
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Expand Up @@ -24,6 +24,7 @@ only_commits:
- appveyor.yml
- ci/appveyor*
- ci/conda*
- ci/scripts/*.bat
- cpp/
- format/
- python/
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2 changes: 2 additions & 0 deletions ci/appveyor-cpp-build.bat
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Expand Up @@ -46,7 +46,9 @@ set ARROW_CMAKE_ARGS=-DARROW_DEPENDENCY_SOURCE=CONDA -DARROW_WITH_BZ2=ON
set ARROW_CXXFLAGS=/WX /MP

@rem Install GCS testbench
set PIPX_BIN_DIR=C:\Windows\
call %CD%\ci\scripts\install_gcs_testbench.bat
storage-testbench -h || exit /B

@rem
@rem Build and test Arrow C++ libraries (including Parquet)
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12 changes: 7 additions & 5 deletions ci/docker/conda-cpp.dockerfile
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Expand Up @@ -42,17 +42,19 @@ RUN mamba install -q -y \
valgrind && \
mamba clean --all

# We want to install the GCS testbench using the Conda base environment's Python,
# because the test environment's Python may later change.
ENV PIPX_PYTHON=/opt/conda/bin/python3
COPY ci/scripts/install_gcs_testbench.sh /arrow/ci/scripts
RUN /arrow/ci/scripts/install_gcs_testbench.sh default

# Ensure npm, node and azurite are on path. npm and node are required to install azurite, which will then need to
# be on the path for the tests to run.
# be on the path for the tests to run.
ENV PATH=/opt/conda/envs/arrow/bin:$PATH

COPY ci/scripts/install_azurite.sh /arrow/ci/scripts/
RUN /arrow/ci/scripts/install_azurite.sh

# We want to install the GCS testbench using the same Python binary that the Conda code will use.
COPY ci/scripts/install_gcs_testbench.sh /arrow/ci/scripts
RUN /arrow/ci/scripts/install_gcs_testbench.sh default

COPY ci/scripts/install_sccache.sh /arrow/ci/scripts/
RUN /arrow/ci/scripts/install_sccache.sh unknown-linux-musl /usr/local/bin

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5 changes: 0 additions & 5 deletions ci/docker/conda-python.dockerfile
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Expand Up @@ -32,11 +32,6 @@ RUN mamba install -q -y \
nomkl && \
mamba clean --all

# XXX The GCS testbench was already installed in conda-cpp.dockerfile,
# but we changed the installed Python version above, so we need to reinstall it.
COPY ci/scripts/install_gcs_testbench.sh /arrow/ci/scripts
RUN /arrow/ci/scripts/install_gcs_testbench.sh default

ENV ARROW_ACERO=ON \
ARROW_BUILD_STATIC=OFF \
ARROW_BUILD_TESTS=OFF \
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27 changes: 19 additions & 8 deletions ci/docker/python-wheel-windows-test-vs2019.dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -35,16 +35,27 @@ RUN setx path "%path%;C:\Program Files\Git\usr\bin"
RUN wmic product where "name like 'python%%'" call uninstall /nointeractive && \
rm -rf Python*

# Install the GCS testbench using a well-known Python version.
# NOTE: cannot use pipx's `--fetch-missing-python` because of
# https://github.com/pypa/pipx/issues/1521, therefore download Python ourselves.
RUN choco install -r -y --pre --no-progress python --version=3.11.9
ENV PIPX_BIN_DIR=C:\\Windows\\
ENV PIPX_PYTHON="C:\Python311\python.exe"
COPY ci/scripts/install_gcs_testbench.bat C:/arrow/ci/scripts/
RUN call "C:\arrow\ci\scripts\install_gcs_testbench.bat" && \
storage-testbench -h

# Define the full version number otherwise choco falls back to patch number 0 (3.8 => 3.8.0)
ARG python=3.8
RUN (if "%python%"=="3.8" setx PYTHON_VERSION "3.8.10" && setx PATH "%PATH%;C:\Python38;C:\Python38\Scripts") & \
(if "%python%"=="3.9" setx PYTHON_VERSION "3.9.13" && setx PATH "%PATH%;C:\Python39;C:\Python39\Scripts") & \
(if "%python%"=="3.10" setx PYTHON_VERSION "3.10.11" && setx PATH "%PATH%;C:\Python310;C:\Python310\Scripts") & \
(if "%python%"=="3.11" setx PYTHON_VERSION "3.11.9" && setx PATH "%PATH%;C:\Python311;C:\Python311\Scripts") & \
(if "%python%"=="3.12" setx PYTHON_VERSION "3.12.4" && setx PATH "%PATH%;C:\Python312;C:\Python312\Scripts") & \
(if "%python%"=="3.13" setx PYTHON_VERSION "3.13.0-rc1" && setx PATH "%PATH%;C:\Python313;C:\Python313\Scripts")
RUN (if "%python%"=="3.8" setx PYTHON_VERSION "3.8.10") & \
(if "%python%"=="3.9" setx PYTHON_VERSION "3.9.13") & \
(if "%python%"=="3.10" setx PYTHON_VERSION "3.10.11") & \
(if "%python%"=="3.11" setx PYTHON_VERSION "3.11.9") & \
(if "%python%"=="3.12" setx PYTHON_VERSION "3.12.4") & \
(if "%python%"=="3.13" setx PYTHON_VERSION "3.13.0-rc1")

# Install archiver to extract xz archives
RUN choco install -r -y --pre --no-progress python --version=%PYTHON_VERSION% & \
python -m pip install --no-cache-dir -U pip setuptools & \
RUN choco install -r -y --pre --no-progress --force python --version=%PYTHON_VERSION% && \
choco install --no-progress -r -y archiver

ENV PYTHON=$python
1 change: 1 addition & 0 deletions ci/docker/ubuntu-20.04-cpp-minimal.dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@ RUN apt-get update -y -q && \
libssl-dev \
libcurl4-openssl-dev \
python3-pip \
python3-venv \
tzdata \
wget && \
apt-get clean && \
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1 change: 1 addition & 0 deletions ci/docker/ubuntu-22.04-cpp-minimal.dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@ RUN apt-get update -y -q && \
libssl-dev \
libcurl4-openssl-dev \
python3-pip \
python3-venv \
tzdata \
wget && \
apt-get clean && \
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1 change: 1 addition & 0 deletions ci/docker/ubuntu-24.04-cpp-minimal.dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@ RUN apt-get update -y -q && \
libssl-dev \
libcurl4-openssl-dev \
python3-pip \
python3-venv \
tzdata \
tzdata-legacy \
wget && \
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13 changes: 11 additions & 2 deletions ci/scripts/install_gcs_testbench.bat
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Expand Up @@ -17,9 +17,18 @@

@echo on

set GCS_TESTBENCH_VERSION="v0.36.0"
set GCS_TESTBENCH_VERSION="v0.40.0"

set PIPX_FLAGS=--verbose
if NOT "%PIPX_PYTHON%"=="" (
set PIPX_FLAGS=--python %PIPX_PYTHON% %PIPX_FLAGS%
)

python -m pip install -U pipx || exit /B 1

@REM Install GCS testbench %GCS_TESTBENCH_VERSION%
python -m pip install ^
pipx install %PIPX_FLAGS% ^
"https://github.com/googleapis/storage-testbench/archive/%GCS_TESTBENCH_VERSION%.tar.gz" ^
|| exit /B 1

pipx list --verbose
20 changes: 12 additions & 8 deletions ci/scripts/install_gcs_testbench.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@
# specific language governing permissions and limitations
# under the License.

set -e
set -ex

if [ "$#" -ne 1 ]; then
echo "Usage: $0 <storage-testbench version>"
Expand All @@ -34,19 +34,23 @@ case "$(uname -m)" in
;;
esac

# On newer pythons install into the system will fail, so override that
export PIP_BREAK_SYSTEM_PACKAGES=1

version=$1
if [[ "${version}" -eq "default" ]]; then
version="v0.39.0"
# Latests versions of Testbench require newer setuptools
python3 -m pip install --upgrade setuptools
fi

: ${PIPX_PYTHON:=$(which python3)}

export PIP_BREAK_SYSTEM_PACKAGES=1
${PIPX_PYTHON} -m pip install -U pipx

# This script is run with PYTHON undefined in some places,
# but those only use older pythons.
if [[ -z "${PYTHON_VERSION}" ]] || [[ "${PYTHON_VERSION}" != "3.13" ]]; then
python3 -m pip install \
"https://github.com/googleapis/storage-testbench/archive/${version}.tar.gz"
pipx_flags=--verbose
if [[ $(id -un) == "root" ]]; then
# Install globally as /root/.local/bin is typically not in $PATH
pipx_flags="${pipx_flags} --global"
fi
${PIPX_PYTHON} -m pipx install ${pipx_flags} "https://github.com/googleapis/storage-testbench/archive/${version}.tar.gz"
fi
40 changes: 22 additions & 18 deletions ci/scripts/python_wheel_windows_test.bat
Original file line number Diff line number Diff line change
Expand Up @@ -37,28 +37,32 @@ set PYARROW_TEST_TENSORFLOW=ON
set ARROW_TEST_DATA=C:\arrow\testing\data
set PARQUET_TEST_DATA=C:\arrow\cpp\submodules\parquet-testing\data

@REM Install testing dependencies
pip install -r C:\arrow\python\requirements-wheel-test.txt || exit /B 1
@REM List installed Pythons
py -0p

set PYTHON_CMD=py -%PYTHON%

@REM Install GCS testbench
call "C:\arrow\ci\scripts\install_gcs_testbench.bat"
%PYTHON_CMD% -m pip install -U pip setuptools || exit /B 1

@REM Install testing dependencies
%PYTHON_CMD% -m pip install -r C:\arrow\python\requirements-wheel-test.txt || exit /B 1

@REM Install the built wheels
python -m pip install --no-index --find-links=C:\arrow\python\dist\ pyarrow || exit /B 1
%PYTHON_CMD% -m pip install --no-index --find-links=C:\arrow\python\dist\ pyarrow || exit /B 1

@REM Test that the modules are importable
python -c "import pyarrow" || exit /B 1
python -c "import pyarrow._gcsfs" || exit /B 1
python -c "import pyarrow._hdfs" || exit /B 1
python -c "import pyarrow._s3fs" || exit /B 1
python -c "import pyarrow.csv" || exit /B 1
python -c "import pyarrow.dataset" || exit /B 1
python -c "import pyarrow.flight" || exit /B 1
python -c "import pyarrow.fs" || exit /B 1
python -c "import pyarrow.json" || exit /B 1
python -c "import pyarrow.orc" || exit /B 1
python -c "import pyarrow.parquet" || exit /B 1
python -c "import pyarrow.substrait" || exit /B 1
%PYTHON_CMD% -c "import pyarrow" || exit /B 1
%PYTHON_CMD% -c "import pyarrow._gcsfs" || exit /B 1
%PYTHON_CMD% -c "import pyarrow._hdfs" || exit /B 1
%PYTHON_CMD% -c "import pyarrow._s3fs" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.csv" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.dataset" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.flight" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.fs" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.json" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.orc" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.parquet" || exit /B 1
%PYTHON_CMD% -c "import pyarrow.substrait" || exit /B 1

@rem Download IANA Timezone Database for ORC C++
curl https://cygwin.osuosl.org/noarch/release/tzdata/tzdata-2024a-1.tar.xz --output tzdata.tar.xz || exit /B
Expand All @@ -67,4 +71,4 @@ arc unarchive tzdata.tar.xz %USERPROFILE%\Downloads\test\tzdata
set TZDIR=%USERPROFILE%\Downloads\test\tzdata\usr\share\zoneinfo

@REM Execute unittest
pytest -r s --pyargs pyarrow || exit /B 1
%PYTHON_CMD% -m pytest -r s --pyargs pyarrow || exit /B 1
68 changes: 34 additions & 34 deletions cpp/src/arrow/filesystem/gcsfs_test.cc
Original file line number Diff line number Diff line change
Expand Up @@ -95,52 +95,52 @@ class GcsTestbench : public ::testing::Environment {
if (const auto* env = std::getenv("PYTHON")) {
names = {env};
}
auto error = std::string(
"Could not start GCS emulator."
" Used the following list of python interpreter names:");
for (const auto& interpreter : names) {
auto exe_path = bp::search_path(interpreter);
error += " " + interpreter;
if (exe_path.empty()) {
error += " (exe not found)";
continue;
}
auto error = std::string("Could not start GCS emulator 'storage-testbench'");

bp::ipstream output;
server_process_ = bp::child(exe_path, "-m", "testbench", "--port", port_, group_,
bp::std_err > output);
auto testbench_is_running = [](bp::child& process, bp::ipstream& output) {
// Wait for message: "* Restarting with"
auto testbench_is_running = [&output, this](bp::child& process) {
std::string line;
std::chrono::time_point<std::chrono::steady_clock> end =
std::chrono::steady_clock::now() + std::chrono::seconds(10);
while (server_process_.valid() && server_process_.running() &&
std::chrono::steady_clock::now() < end) {
if (output.peek() && std::getline(output, line)) {
std::cerr << line << std::endl;
if (line.find("* Restarting with") != std::string::npos) return true;
} else {
std::this_thread::sleep_for(std::chrono::milliseconds(20));
}
std::string line;
std::chrono::time_point<std::chrono::steady_clock> end =
std::chrono::steady_clock::now() + std::chrono::seconds(10);
while (process.valid() && process.running() &&
std::chrono::steady_clock::now() < end) {
if (output.peek() && std::getline(output, line)) {
std::cerr << line << std::endl;
if (line.find("* Restarting with") != std::string::npos) return true;
} else {
std::this_thread::sleep_for(std::chrono::milliseconds(20));
}
return false;
};
}
return false;
};

if (testbench_is_running(server_process_)) break;
error += " (failed to start)";
server_process_.terminate();
server_process_.wait();
auto exe_path = bp::search_path("storage-testbench");
if (!exe_path.empty()) {
bp::ipstream output;
server_process_ =
bp::child(exe_path, "--port", port_, group_, bp::std_err > output);
if (!testbench_is_running(server_process_, output)) {
error += " (failed to start)";
server_process_.terminate();
server_process_.wait();
}
} else {
error += " (exe not found)";
}
if (!server_process_.valid()) {
error_ = std::move(error);
}
if (server_process_.valid() && server_process_.valid()) return;
error_ = std::move(error);
}

bool running() { return server_process_.running(); }

~GcsTestbench() override {
// Brutal shutdown, kill the full process group because the GCS testbench may launch
// additional children.
group_.terminate();
try {
group_.terminate();
} catch (bp::process_error&) {
}
if (server_process_.valid()) {
server_process_.wait();
}
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7 changes: 3 additions & 4 deletions python/pyarrow/tests/conftest.py
Original file line number Diff line number Diff line change
Expand Up @@ -233,17 +233,16 @@ def minio_server_health_check(address):
def gcs_server():
port = find_free_port()
env = os.environ.copy()
args = [sys.executable, '-m', 'testbench', '--port', str(port)]
exe = 'storage-testbench'
args = [exe, '--port', str(port)]
proc = None
try:
# check first if testbench module is available
import testbench # noqa:F401
# start server
proc = subprocess.Popen(args, env=env)
# Make sure the server is alive.
if proc.poll() is not None:
pytest.skip(f"Command {args} did not start server successfully!")
except (ModuleNotFoundError, OSError) as e:
except OSError as e:
pytest.skip(f"Command {args} failed to execute: {e}")
else:
yield {
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2 changes: 1 addition & 1 deletion python/scripts/run_emscripten_tests.py
Original file line number Diff line number Diff line change
Expand Up @@ -335,7 +335,7 @@ def _load_pyarrow_in_runner(driver, wheel_name):
"""
import pyarrow,pathlib
pyarrow_dir = pathlib.Path(pyarrow.__file__).parent
pytest.main([pyarrow_dir, '-v'])
pytest.main([pyarrow_dir, '-r', 's'])
""",
wait_for_terminate=False,
)
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4 changes: 2 additions & 2 deletions r/tests/testthat/test-gcs.R
Original file line number Diff line number Diff line change
Expand Up @@ -116,12 +116,12 @@ test_that("GcsFileSystem$create() can read json_credentials", {
})

skip_on_cran()
skip_if_not(system('python -c "import testbench"') == 0, message = "googleapis-storage-testbench is not installed.")
skip_if_not(system("storage-testbench -h") == 0, message = "googleapis-storage-testbench is not installed.")
library(dplyr)

testbench_port <- Sys.getenv("TESTBENCH_PORT", "9001")

pid_minio <- sys::exec_background("python", c("-m", "testbench", "--port", testbench_port),
pid_minio <- sys::exec_background("storage-testbench", c("--port", testbench_port),
std_out = FALSE,
std_err = FALSE # TODO: is there a good place to send output?
)
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