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@AmandaBirmingham AmandaBirmingham released this 05 May 00:37
· 28 commits to main since this release
4.0.0
44b1e6b
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Learn about vigilant mode.

Major release:

  • Change from SGE scheduler to Slurm scheduler to support AWS ParallelCluster version 3
  • Update installation script and conda environment yaml, including
    • Upgrade to pi_from_pileup version 1.0.3
    • Install iVar via conda
  • Update and extend README.md with detail on installation and cluster creation
  • Update folder structure and script names for better usability
  • Output full *pi_from_pileup.tsv for each sample in addition to *pi-metric.tsv
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