Sequence analysis using USEARCH pipelines
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Updated
Jan 13, 2021 - Shell
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usearch-pipelines
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These scripts were used to bioinformatically process the NGS data associated with the manuscript entitled "Illuminating the bacterial microbiome of Australian ticks from companion animals with next-generation sequencing", authored by Telleasha L. Greay, Kimberly L. Evasco, Megan L. Evans, Paola Magni, Una M. Ryan and Peter J. Irwin. The raw data…
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Jun 3, 2021 - Shell
A snakemake pipeline for amplicon (16S, 18S, ITS) sequence analysis using Usearch.
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Jul 25, 2023 - Python
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