qtl-mapping
Here are 27 public repositories matching this topic...
DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.
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Aug 6, 2024
R package for random-effect multiple QTL mapping in autopolyploids
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Mar 20, 2024 - R
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
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Aug 9, 2022 - C
GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]
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Mar 18, 2024 - Jupyter Notebook
MapMaker/Exp 3.0b and MapMaker/QTL 1.1, updated to add various improvements including multithreading
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Oct 14, 2019 - C
Code and data from the Bredeson, Lyons, et al. Dioscorea alata var. TDa95/00328 v2 genome and analysis manuscript.
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Jul 29, 2022 - R
Pipeline for polymap and QTL Mapping
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Nov 13, 2019 - R
MetaPipe: A High-Performance Computing pipeline for QTL mapping of large metabolomic datasets
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Nov 21, 2022 - R
Scripts of Final Master Project
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Sep 7, 2023 - R
Wheat BRIL database created using FLASK server side, angularjs is heavily used at front end
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Nov 12, 2018 - Python
In-silico methods for finemapping of genetic regions in inbred mice
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Aug 28, 2022 - R
Repository for genomic webapplications served from GitHub pages
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Nov 11, 2020 - JavaScript
To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker analysis to interval mapping.
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May 11, 2021 - R
Jackson Labs Summer Student Program 2018, Bar Harbor, ME. Statistically analyzing the effect of genetic diversity on the aging heart. Final paper: https://docs.google.com/document/d/1rkDRjnS6XhkFGk6EpzB4V24XqJdfN_JaM4vh5cc3iBA/edit
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Aug 8, 2018 - R
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