Indexing of FASTA files for searching peptide masses and sequences
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Updated
May 23, 2023 - Java
Indexing of FASTA files for searching peptide masses and sequences
Converter from DTASelect to pepXML formats
Repository for proteomic data analysis used in the publication "Disruption of acetyl-lysine turnover in muscle mitochondria promotes insulin resistance and redox stress without overt respiratory dysfunction."
Smart, light, easy and robust Thermo RAW files backup program
Molecular biology experiments, mass spectrometry-based proteomics, and reproducible data analysis in R
QC scripts for LC-MS proteomic equipment based on Proteome Discoverer 2.4 output
My professional repository of project and publication data files in computational biology and data science.
Proteomic Data Manager is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.
Python pipeline for Absolute Protein Quantification data analysis
R Shiny App to show basic features of microbial genomes
A python-based program to optimise mass spectrometer collision energies for peptides in HDX-MS experiments
Making volcano plots from proteomic data in IgorPro
Prediction of molecular subtypes of Breast Cancer based on TCGA proteomic data
Github repository for nanoSPLITS manuscript data and R scripts
Parser for quantitative data from files created by Census software.
Repository for proteomic data analysis used in the publication "Extreme Acetylation of the Cardiac Mitochondrial Proteome Does Not Promote Heart Failure."
Mass spectrometry Perseus Data analysis
Tool to automatically upload result file to Proteomics Data Manager (mainly for MS based proteomics)
ASDParser
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