Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
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Updated
Apr 3, 2024 - Python
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
NOVOPlasty - The organelle assembler and heteroplasmy caller
mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
A python and C++ library for reading and writing neuronal morphologies
Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari
a tool for predicting mitochondrial DNA deletions using soft-clipping
Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
Consensus calling (or "reference assisted assembly"), chiefly of ancient mitochondria
Repository to reproduce all analyses for Lareau*, Ludwig*, et al. 2020
Module and script to remove contamination in assembled genomes before submission to ncbi
visualization of the human mitochondrial genome
A small pipeline for assembling mitochondrial genomes and filtering reads prior to assembly.
Deepred-Mt is a novel method based on deep neural networks to predict C-to-U editing sites in angiosperm mitochondrial RNA.
EM segmentation of mitochondria from SNEMI3D data
MToolBox pipeline written in snakemake to allow a better scalability
Infer the dynamics of mitochondrial heteroplasmy during different life stages using population genetics and phylogenetics
LOCALIZER: subcellular localization prediction of plant and effector proteins in the plant cell
El genoma pequeño - analysis workflow for "the little genome"
Toolbox for Identifying Mitochondria Instance Segmentation Errors
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