Homepage for my research group as an example of LYX Jekyll Theme.
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Updated
Sep 10, 2024 - HTML
Homepage for my research group as an example of LYX Jekyll Theme.
Computational statistical mechanics of field-responsive polymer chains
pyMBE provides tools to facilitate building up molecules with complex architectures in the Molecular Dynamics software ESPResSo. For an up-to-date API documention please check our website:
Python code to model spinodal decomposition using the Cahn-Hilliard equation.
Polymer chain simulation: Linear or circular configurational, optional and adjustable EV.
Fit sticky-reptation model to experimental linear viscoelasticity data
Use PyConforMap to generate a simple scatter plot to map conformational landscapes of intrinsically disordered proteins, and quantify conformational diversity.
Code to model active loop extrusion on chromatin using hybrid MD-MC.
a tool for the analysis of multiplexed FISH (Fluorescence In Situ Hybridization) data
Simulation scripts used in the study "Separation of sticker-spacer energetics governs the coalescence of metastable biomolecular condensates"
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