LLM for Drug Editing, ICLR 2024
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Updated
May 28, 2024 - Python
LLM for Drug Editing, ICLR 2024
Predict AMPs in (meta)genomes and peptides
This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)
A Rust implementation of the LightDock macromolecular docking software
Snakemake-based computational workflow for neoantigen prediction from diverse sources
mPARCE: Protocol for iterative optimization of modified peptides bound to protein targets
The GAN model for designing AMP
Python script to visualize helical wheels based on input sequence.
Tools for exploration and analysis of biochemical data like genomics and proteins
Application of deep generative model discovers novel and diverse functional peptides against microbial resistance
A parametric approach for molecular encodings using multilevel atomic neighborhoods applied to peptide classification
Protein Cleaver is a versatile tool for protein analysis and digestion.
Electronic lab notebook for organic chemistry
Project for course DD2404. The project focuses on creating a classifier for proteins with signal peptides, using machine learning. Currently, the scripts are based on Convolutional neural networks, but I might implement a GAN and a Hidden Markov Model too.
SARS-CoV-2 Peptide Vaccine, Gen 12
Highly customizable research-oriented peptide search engine
Peptide Mapping in Genome and peptide Detection in Transcriptomes
📦 R package to visualise peptide sequences
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