kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more
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Updated
Jul 7, 2024 - Rust
kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more
K-mer counting algorithms and count-data utilities for the BioJulia framework
Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.
A simple tool to generate hierarchical clustering trees from nucleotide sequences. Supports a number of distance metrics and clustering algorithms. Includes a large testset of SARSCOV2 genomes.
Test if a kmer is or is not in a set of sequences
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