A series of scripts used for transferring and validating files with gluster, and for submitting condor jobs
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Updated
May 14, 2018 - Shell
A series of scripts used for transferring and validating files with gluster, and for submitting condor jobs
Script to process illumina reads from museum specimens
Automated processing and haplotype inference for double-barcoded PCR amplicons
Custom plugins for the MultiQC tool.
HiPR: High-throughput Probabilistic inference of RNA structure
NGS Processing Pipelines for WGS and WES data
Perl, R, Python, and Bash Shell source codes for high-throughput sequencing (the 2nd, 3rd, and 4th generation sequencing for DNA, RNA, and Protein) data analysis by integrating lots of open-source tools or softwares.
This package creates segmentation of the genome into regions of biological significance from high-throughput sequencing data.
nim-lang wrapper for https://github.com/38/d4-format
Jupyter server for Duke Biostatistics and Bioinformatics high-throughput sequencing and analysis workshop summer 2017
All codes about ExMdb data processing
Identification of clusters of co-expressed genes based on their expression across multiple (replicated) biological samples.
use the noise
A summary of the scripts used in performing quality filtering and data analysis of Illumina high throughout bacterial sequences involved in this freshwater aquatic invertebrate microbiota study.
hamPCR + Douglas-fir + needle fungi
The AssayCorrector eliminates spatial bias in HTS assays using PMP methods.
Whisper 2: indel-sensitive short read mapping. To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711021000376
Raesymatto: visualize genomic data
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