Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing
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Updated
Jul 19, 2024 - C++
Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing
🧪 New pipeline for detecting pseudouridine modification on RNA (BID-seq, etc)
Analyse RNA feature distributions.
🧪 Optimized protocol for m6A-SAC-seq
Magnipore: Differential single nucleotide changes of ONT signals
Online version of tool is live
CatMOD is a CatBoost-based feature-concatenation model for RNA modification recognition from ONT DRS.
Ultrafast bisulfite
High-throughput Workflow for Processing and Analyzing RNA-Seq Data
Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing
Annotates modomics RNA sequences for easy viewing of RNA modifications and nucleotide positions.
High-throughput pipeline for modified mRNA annotation and long non-coding RNA annotation
handful of tools that might be needed before or after HAMR
Guide for the Baccarelli Lab GitHub
A bundle of HAMRtools for High-throughput RNA modification prediction and analysis
Base-conversion Sequencing Aligner
Database of pairwise consensuses for miR-mRNA target interactions
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