How to: create drug codelists for recorded prescriptions
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Updated
Oct 20, 2023 - Stata
How to: create drug codelists for recorded prescriptions
Lecture slides on Electronic Health Record Data Quality
This project shows a method with a topic modeling approach: non-negative matrix factorization (NMF), used in EHR for subphenotyping and identifying the relationship between phenotypes and genetic variants
How to: find acute exacerbation of COPD events in UK primary care electronic healthcare records
Introduction to PERMIT project resources
Cast different EHR (electronic health record) layers to a shared latent space to identify patient subtypes
RETIRED - Clinical phenotyping and ETL system
How to: create SNOMED CT codelists
The OMOP Common Data Model(v6) implemented in Django (v3)
Code accompanying our ACM CHIL paper: "TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records"
A software toolkit for the interconversion of standard data models for phenotypic data
using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)
[ML4H 2022] This is the code for our paper `Counterfactual and Factual Reasoning over Hypergraphs for Interpretable Clinical Predictions on EHR'.
Repository for the GA4GH phenopacket schema
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