Visualization of co-expression networks
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Updated
Jul 27, 2022 - Java
Visualization of co-expression networks
Weighted Gene Co-expression Network Analysis;
MRHCA: a nonparametric statistics based method for hub and co-expression module identification in large gene co-expression network
Repository for all R scripts and results associated with my research dissertation for the MSc Bioinformatics and Computational Biology degree in University College Cork, 2022.
A nonparametric statistics based method for hub and co-expression module identification in large gene co-expression network
Object Icon, beginning from a migration to Git of the Subversion at https://sourceforge.net/p/objecticon/code/ For the original, use branch objecticon-last-svn-commit
SCANet is a python package that incorporates the inference of gene co-expression networks from single-cell gene expression data
Curated list of analysis pipelines for biological & clinical interpretation of data-driven findings
Data repository of the manuscript: Transcriptomic profiling of castes and of sexually and parthenogenetically produced reproductive females in the termite Cavitermes tuberosus
Gene co-expression network analysis
Masters' thesis: Construction & analysis of miRNA-RAB sub-networks in human RAB associated disorders- A network biology approach
The COWAS (co-expression-wide association study) method identifies pairs of co-expressed proteins that are associated with disease.
Discovering cis-regulatory motifs in proximal promoters of plants in RSAT::Plants
Conserved and Comparative Co-expression across Diverse Species
Code accompanying the manuscript "Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia"
LEGEND: An integrative algorithm for identifying co-expressed and cofunctional genes in multimodal transcriptomic sequencing data
CoExp website is a web-based tool developed in .NET Core Framework, for querying 109 independent gene co-expression networks from the family of CoExp R packages.
Gene Co-expression Network analysis pipeline
Causal inference, differential expression, and co-expression for scRNA-seq
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