A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
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Updated
Aug 19, 2024 - R
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
Analysis of Single Molecule Footprinting (SMF) data for the analysis of DNA methylation, chromatin accessibility and TF binding. The repository contains all primary code to reproduce the main analyses for the publication "Single molecule footprinting identifies context-dependent regulation of enhancers by DNA methylation" (Kreibich et al., 2023)
A robust statistical test for TF footprint data analyses
scRNA-seq and scATAC-seq utilities
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