Paintera paintera-1.4.2

🐛 Bug Fixes

• Navigation in shape interpolation working correctly
• Don't double-activate tools unnecessarily

Paintera paintera-1.4.1

[paintera-1.4.1] - 2024-08-13

🚀 Features

• Add some N5 convenience extension methods for get/set attributes
• [breaking] Support read-only ID services

🐛 Bug Fixes

• Serialize label block lookup to paintera data metadata properly
• Remove all tool listeners when deactivating
• Replace the mask if floodfill cancelled on first slice of shape interpolation
• Respect useVolatileIfAvailable parameter
• Fill tool should be cancellable
• Set valid datasets directly, not on JavaFx thread
• Some race conditions triggered by activating/deactivate modes/tools out of order
• Trigger rendering when returning from maximized viewer
• Points managed on javafx thread
• useSystemProperties() for HttpClientBuilder, and join servicesUrl with /

🚜 Refactor

• Simplify display listener logic

⚡ Performance

• Provide ref for lme iteration
• Deactivate run on Default Dispatcher, can be blocked (see Fill2Dtool) or delayed
• Some flood fill optimizations
• Don't parallelize within the block when downsampling. Parallelization should happen across blocks
• Support empty blocks when downsampling label multiset data
• Short-circuit null if access is empty

🧪 Testing

• Convert to kotlin

⚙️ Miscellaneous Tasks

• Add convenience method
• Style,misc
• Dep version bumps
• Version bumps

Build

• Bump deps

Paintera paintera-1.3.4

🐛 Bug Fixes

• Use LocalIdService when writer isn't available
• Some regressions from the perf commit
• NPE when canceling without a button pressed in commit dialog
• Some graphical issues with incorrect interpolation rendering, an incorrect triggering of adding/removing slices with flood fill (tool or click)
• Selection objects at interpolant in SI mode
• Unlocked slices should start in temporary prompt mode
• Default to N5 as often as possible; require for new label multiset type labels

🚜 Refactor

• Remove reactivex dependency
• Temporary projects should be N5
• Prefer coroutines to Tasks
• Tasks -> coroutines
• (BREAKING) Migrate to new saalfx coroutine backend
• Default to N5 logic encapsulated in N5FactoryWithCache

⚡ Performance

• Better handling of invalid user input, vs exceptions when creating dataset
• Improve floodfill 2D performance

⚙️ Miscellaneous Tasks

• Unused code, reorder imports

Build

• Bump dep versions, pom-scijava
• Remove saalfx snapshot dep
• Bump app.version

Paintera paintera-1.3.3

[paintera-1.3.3] - 2024-06-24

🚀 Features

• Add source specfic keys for raw source

🐛 Bug Fixes

• Restart SAM_TASK_SCOPE if an exception is thrown
• Issue where an old embedding and transform would be shown to the user
• Flood fill in shape interpolation should be cancellable

⚙️ Miscellaneous Tasks

• Bump saalfx

Paintera paintera-1.3.2

[paintera-1.3.2] - 2024-06-20

🐛 Bug Fixes

• Issues with orthoslice meshes on Apple Silicon Mac Sonoma

Build

• Version bumps for N5 bug fixes

Paintera paintera-1.3.1

[paintera-1.3.1] - 2024-06-13

🚀 Features

• Toggle whether background ID color is visible or not. NOT visible by default
• Start with first ID when creating a new label source.
• Toggle in color converter for background ID visibility

🐛 Bug Fixes

• Scalar label datasets should be uint64
• Fail early if out of bounds
• Improve cleanup of resources from ViewerMask

⚡ Performance

• Don't create meshes for temporary IDs
• Invalidate embeddings when leaving SI mode
• Use IO Dispatcher instead of UtilityTask

Paintera paintera-1.3.0

[paintera-1.3.0] - 2024-06-10

🚀 Features

• Named binding keys for SAM key bindings.
• Auto-contrast actions for Raw sources
• Prompt point per connected component in shape interpolation auto-sam
• Create scalar label sources
• Replace existing slice with manual SAM if current slice was auto-predicted

🐛 Bug Fixes

• Initial color for mesh defaulting to WHITE
• Remove meshes when removing threshold source
• Initialize to label when paintera label type known from metadata
• Don't serialize null Properties
• Handle SAM in ShapeInterpolation when label source is smaller than viewrer
• Invalidate key if cancelled
• Refresh SI mask when leaving SAM mode
• Reduce flickering and double-prediction during bisect-all auto-sam

Build

• Bump versions
• Misc installer changes
• Dep version fix

Paintera paintera-1.2.3

[paintera-1.2.3] - 2024-05-31

🐛 Bug Fixes

• Postinst, version
• Typo in symlink path
• App version

⚙️ Miscellaneous Tasks

• Specify javafx.platform for mac

Paintera paintera-1.2.2

[paintera-1.2.2] - 2024-05-24

🐛 Bug Fixes

• Incomplete rendering at target resolution
• Remove old projector after cancel, replace with new on next frame
• Specify current or initial for displayToMask
• Ignore disable on tool switch-back triggers
• Paint in auto-SAM slices
• SAM MIDI device accept prediction

🚜 Refactor

• Current depth/slice updates and downstream listeners

Paintera paintera-1.2.1

[paintera-1.2.1] - 2024-05-23

🚀 Features

• Use standard application cache dir
• [breaking] Use standard application cache dir
• Build with JDK 21

🐛 Bug Fixes

• (test) Update tests
• Incorrect transform for displayToMask

🚜 Refactor

• Use KotlinLogging instead of SLf4J
• Remove SplashScreenshowPreloader
• Massive reoragnization

📚 Documentation

• Add badges, update for new release process

🧪 Testing

• Remove unfinshed test

⚙️ Miscellaneous Tasks

• Remove unnecessary configuration

Build

• Migrate to jdk 21
• Explicitly specify annotation processors
• (security) Bump logback version
• Add command to /usr/local/bin on install