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Quadram Institute Bioscience

Popular repositories

  1. socru socru Public

    Order and orientation of complete bacterial genomes

    Python 26 6

  2. dadaist2 dadaist2 Public

    Dadaist2 🟨 Highway to R

    HTML 13 5

  3. albatradis albatradis Public

    Comparative TraDIS analysis

    Gnuplot 8 4

  4. tatajuba tatajuba Public

    Identification and classification of homopolymeric tracts from reads.

    C 6

  5. phage-annotation-workshop phage-annotation-workshop Public

    Phage Annotation Workshop 2021

    HTML 6 1

  6. parallel-virfinder parallel-virfinder Public

    Run virfinder in parallel

    Python 6

Repositories

Showing 10 of 92 repositories
  • peroba Public

    Phylogenetic Epidemiology with ROBust Assignment

    quadram-institute-bioscience/peroba’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Aug 19, 2024
  • biomcmc-lib Public

    C library with lowlevel functions used by other software

    quadram-institute-bioscience/biomcmc-lib’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Aug 19, 2024
  • uvaia Public

    Reference-based alignment and sequence database search of SARS-CoV-2 genomes.

    quadram-institute-bioscience/uvaia’s past year of commit activity
    C 4 GPL-3.0 0 0 0 Updated Aug 19, 2024
  • tatajuba Public

    Identification and classification of homopolymeric tracts from reads.

    quadram-institute-bioscience/tatajuba’s past year of commit activity
    C 6 GPL-3.0 0 2 0 Updated Aug 19, 2024
  • amburana Public

    Alignment-free sequence clustering

    quadram-institute-bioscience/amburana’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Aug 19, 2024
  • biobakery-2024 Public

    A QIB Workshop on popular tools part of the "BioBakery" suite (https://github.com/biobakery/biobakery)

    quadram-institute-bioscience/biobakery-2024’s past year of commit activity
    HTML 0 CC0-1.0 0 0 0 Updated Aug 13, 2024
  • tweety-gut Public

    Metagenomic investigation of the faecal microbiomes of great tits and blue tits provides insights into the host, diet, pathogens and microbial biodiversity

    quadram-institute-bioscience/tweety-gut’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Aug 7, 2024
  • 2024-campymags Public

    Datasets and scripts for article "Capturing clinically relevant Campylobacter attributes through direct whole genome sequencing of stool"

    quadram-institute-bioscience/2024-campymags’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Jul 30, 2024
  • qib-irida-uploader Public

    A wrapper of iridauploader for creating project and uploading samples to QIB IRIDA

    quadram-institute-bioscience/qib-irida-uploader’s past year of commit activity
    Python 0 0 0 0 Updated Jul 24, 2024
  • QuaTradis Public

    A pipeline to analyse transposon directed insertion-site sequencing

    quadram-institute-bioscience/QuaTradis’s past year of commit activity
    Gnuplot 2 GPL-3.0 0 2 0 Updated Jul 16, 2024
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