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Improve logsumexp to work with infinite values #4360

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merged 3 commits into from
Dec 20, 2020

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ricardoV94
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Changed math.logsumexp to work with infinite values, in line with how scipy.special.logsumexp works.

pm.math.logsumexp([-np.inf, -np.inf]).eval()   # used to return array([nan]), now returns array([-inf])

Added new unit tests, comparing the behavior with that of the scipy function. Except for the first two tests, all tests are failing in the current version of master, and pass after the PR.

@ricardoV94 ricardoV94 changed the title Improve logsumexp Improve logsumexp to work with infinite values Dec 20, 2020
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codecov bot commented Dec 20, 2020

Codecov Report

Merging #4360 (1caf89b) into master (34447a7) will increase coverage by 0.00%.
The diff coverage is 100.00%.

Impacted file tree graph

@@           Coverage Diff           @@
##           master    #4360   +/-   ##
=======================================
  Coverage   87.95%   87.95%           
=======================================
  Files          88       88           
  Lines       14499    14500    +1     
=======================================
+ Hits        12752    12753    +1     
  Misses       1747     1747           
Impacted Files Coverage Δ
pymc3/math.py 68.64% <100.00%> (+0.17%) ⬆️

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@AlexAndorra AlexAndorra left a comment

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Nice catch, thanks @ricardoV94 !

@AlexAndorra AlexAndorra merged commit 0e9b9a4 into pymc-devs:master Dec 20, 2020
@ricardoV94 ricardoV94 deleted the improve_logsumexp branch December 20, 2020 12:55
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2 participants