Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support converting .cool to .hic files #7

Merged
merged 17 commits into from
Jun 27, 2023
Merged

Support converting .cool to .hic files #7

merged 17 commits into from
Jun 27, 2023

Conversation

robomics
Copy link
Contributor

@robomics robomics commented Jun 24, 2023

The actual conversion is currently performed by juicer_tools.

@codecov
Copy link

codecov bot commented Jun 26, 2023

Codecov Report

Merging #7 (10e05c5) into main (0ce40f7) will increase coverage by 0.07%.
The diff coverage is 75.00%.

@@            Coverage Diff             @@
##             main       #7      +/-   ##
==========================================
+ Coverage   80.90%   80.98%   +0.07%     
==========================================
  Files          49       50       +1     
  Lines        3289     3260      -29     
==========================================
- Hits         2661     2640      -21     
+ Misses        628      620       -8     
Impacted Files Coverage Δ
src/cooler/validation_impl.hpp 86.06% <ø> (ø)
src/hic/utils_impl.hpp 66.66% <ø> (ø)
src/common/include/hictk/tmpdir.hpp 85.71% <75.00%> (ø)

... and 7 files with indirect coverage changes

@robomics robomics force-pushed the impl-cool2hic branch 3 times, most recently from ddd12ae to c2fcf93 Compare June 27, 2023 17:32
@robomics robomics force-pushed the impl-cool2hic branch 3 times, most recently from 1c6eabf to c79ee15 Compare June 27, 2023 19:42
@robomics robomics merged commit ae25d94 into main Jun 27, 2023
19 of 22 checks passed
@robomics robomics deleted the impl-cool2hic branch June 27, 2023 22:57
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant