Brain Hacking 101

Brain Hacking 101 Course for the 2015 HBM Hackathon in Honolulu Hawaii

Morning Session

• 08:00am - Continental Breakfast
• 09:00am - Open Science and Collaborative Hacking (Satra Ghosh)
• 09:40am - Practical Scientific Computing in Brain Imaging (Ariel Rokem)
• 10:20am - Coffee Break
• 10:40am - Neuroimaging Data Sharing (Cameron Craddock)
• 11:20am - Big Data and Cloud Computing (Dave Kennedy + Harry Chen (MS Azure))
• 12:00pm - Lunch

Afternoon Session

• 1:00pm : Introduction (Cameron Craddock)
• 1:15pm : Loris (Samir Das)
• 1:30pm : Duecredit (Yaroslav Halchenko)
• 1:45pm : HCP in nipype (Eric Earl)
• 2:00pm : Brainspell (Roberto Toro)
• 2:15pm : Nipype in CBrain (Tristan Glatard)
• 2:30pm : Popeye (Kevin Desimone)
• 2:45pm : Self organization and brain function (Jörg Peter)
• 3:00pm : BREAK
• 3:30pm : Open data in the cloud (David O'Conner)
• 3:45pm : Neurovault (Chris Gorgolewski)
• 4:00pm : Dipy (Ariel Rokem)
• 4:15pm : Workflow reproducibility (David Kennedy)

Hands on Hacking Sessions

• Each day from 1pm-4pm

Monday

Repeating at 1 PM, 2PM, and 3 PM (50 minutes)

• Scientific computing for neuorimaging with Python: A hands-on tutorial. Link to Notebooks

Tuesday

• LONI Pipeline
• C-PAC

Wednesday

• NITRC Computational Environment

Thursday

• ...