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@ocbe-uio

Oslo Centre for Biostatistics and Epidemiology

This is where we host some of the scientific software we produce at OCBE, a joint center between the University of Oslo and the Oslo University Hospital.

Popular repositories

  1. BayesMallows BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    R 21 9

  2. teaching_mf9130e teaching_mf9130e Public

    Course material for MF9130E

    R 13 9

  3. DIscBIO DIscBIO Public

    A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

    Jupyter Notebook 12 5

  4. rBAPS rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    R 10 4

  5. survomics survomics Public

    Tutorial on survival modeling with omics data

    TeX 10 1

  6. trajpy trajpy Public

    Trajpy - empowering feature engineering for trajectory analysis across domains.

    Python 6 2

Repositories

Showing 10 of 52 repositories
  • rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    ocbe-uio/rBAPS’s past year of commit activity
    R 10 GPL-3.0 4 9 (2 issues need help) 0 Updated Aug 26, 2024
  • bd4predict Public

    BD4QoLPredict is an API and Dashboard developed in the context of the BD4QoL European project for improving quality of life of head and neck cancer survivors.

    ocbe-uio/bd4predict’s past year of commit activity
    Python 0 0 0 0 Updated Aug 23, 2024
  • survomics Public

    Tutorial on survival modeling with omics data

    ocbe-uio/survomics’s past year of commit activity
    TeX 10 MIT 1 1 0 Updated Aug 22, 2024
  • pCRscore Public

    Python package to calculate pCR scores

    ocbe-uio/pCRscore’s past year of commit activity
    Python 0 GPL-3.0 0 1 0 Updated Aug 22, 2024
  • TruncExpFam Public

    R package to generate data related to the Truncated Exponential Family

    ocbe-uio/TruncExpFam’s past year of commit activity
    R 0 GPL-3.0 1 2 0 Updated Aug 21, 2024
  • MADMMplasso Public

    Multi variate multi response 'ADMM' with interaction effects

    ocbe-uio/MADMMplasso’s past year of commit activity
    R 0 GPL-3.0 0 3 1 Updated Aug 20, 2024
  • BayesSurvive Public

    Bayesian survival models for high-dimensional data

    ocbe-uio/BayesSurvive’s past year of commit activity
    R 1 GPL-3.0 1 1 0 Updated Aug 19, 2024
  • ctu-template Public
    ocbe-uio/ctu-template’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 19, 2024
  • BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    ocbe-uio/BayesMallows’s past year of commit activity
    R 21 GPL-3.0 9 8 0 Updated Aug 17, 2024
  • OCBEdev Public

    Development tools for R packages (complements `devtools`, `usethis`, etc.)

    ocbe-uio/OCBEdev’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Aug 9, 2024
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