Locate LOH in WGS data

Install conda

Create nextflow conda environment

conda create -n nextflow nextflow pandas -c bioconda
conda activate nextflow

Make sample plan for each sample

python bin/write_files.py -d /data/kdi_prod/project_result/948/01.00/Analysis/D050 -o sample_plan.csv

conda env export --from-history -n name_of_your_env -f environment.yml