doc(update) [skip ci]

.buildinfo

@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 7d3fff51cfe5844ccf29da8982194c40
+tags: 645f666f9bcd5a90fca523b33c5a78b7

0.21/.buildinfo

@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 7d3fff51cfe5844ccf29da8982194c40
+tags: 645f666f9bcd5a90fca523b33c5a78b7

0.21/_sources/api.rst.txt

@@ -0,0 +1,17 @@
+Library API (application programmer interface)
+==============================================
+
+.. automodule:: pydra
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Subpackages
+-----------
+
+.. toctree::
+
+   api/pydra.engine
+   api/pydra.mark
+   api/pydra.tasks
+   api/pydra.utils

0.21/_sources/api/pydra.engine.audit.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.audit module
+=========================
+
+.. automodule:: pydra.engine.audit
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.boutiques.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.boutiques module
+=============================
+
+.. automodule:: pydra.engine.boutiques
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.core.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.core module
+========================
+
+.. automodule:: pydra.engine.core
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.graph.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.graph module
+=========================
+
+.. automodule:: pydra.engine.graph
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.helpers.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.helpers module
+===========================
+
+.. automodule:: pydra.engine.helpers
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.helpers_file.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.helpers\_file module
+=================================
+
+.. automodule:: pydra.engine.helpers_file
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.helpers_state.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.helpers\_state module
+==================================
+
+.. automodule:: pydra.engine.helpers_state
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.rst.txt

@@ -0,0 +1,26 @@
+pydra.engine package
+====================
+
+.. automodule:: pydra.engine
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Submodules
+----------
+
+.. toctree::
+   :maxdepth: 1
+
+   pydra.engine.audit
+   pydra.engine.boutiques
+   pydra.engine.core
+   pydra.engine.graph
+   pydra.engine.helpers
+   pydra.engine.helpers_file
+   pydra.engine.helpers_state
+   pydra.engine.specs
+   pydra.engine.state
+   pydra.engine.submitter
+   pydra.engine.task
+   pydra.engine.workers

0.21/_sources/api/pydra.engine.specs.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.specs module
+=========================
+
+.. automodule:: pydra.engine.specs
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.state.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.state module
+=========================
+
+.. automodule:: pydra.engine.state
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.submitter.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.submitter module
+=============================
+
+.. automodule:: pydra.engine.submitter
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.task.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.task module
+========================
+
+.. automodule:: pydra.engine.task
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.engine.workers.rst.txt

@@ -0,0 +1,7 @@
+pydra.engine.workers module
+===========================
+
+.. automodule:: pydra.engine.workers
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.mark.functions.rst.txt

@@ -0,0 +1,7 @@
+pydra.mark.functions module
+===========================
+
+.. automodule:: pydra.mark.functions
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.mark.rst.txt

@@ -0,0 +1,15 @@
+pydra.mark package
+==================
+
+.. automodule:: pydra.mark
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Submodules
+----------
+
+.. toctree::
+   :maxdepth: 1
+
+   pydra.mark.functions

0.21/_sources/api/pydra.tasks.rst.txt

@@ -0,0 +1,7 @@
+pydra.tasks package
+===================
+
+.. automodule:: pydra.tasks
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.utils.messenger.rst.txt

@@ -0,0 +1,7 @@
+pydra.utils.messenger module
+============================
+
+.. automodule:: pydra.utils.messenger
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.utils.profiler.rst.txt

@@ -0,0 +1,7 @@
+pydra.utils.profiler module
+===========================
+
+.. automodule:: pydra.utils.profiler
+   :members:
+   :undoc-members:
+   :show-inheritance:

0.21/_sources/api/pydra.utils.rst.txt

@@ -0,0 +1,16 @@
+pydra.utils package
+===================
+
+.. automodule:: pydra.utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Submodules
+----------
+
+.. toctree::
+   :maxdepth: 1
+
+   pydra.utils.messenger
+   pydra.utils.profiler

0.21/_sources/changes.rst.txt

@@ -0,0 +1,132 @@
+Release Notes
+=============
+
+0.8.0
+-----
+
+* refactoring template formatting for ``input_spec``
+* fixing issues with input fields with extension (and using them in templates)
+* adding simple validators to input spec (using ``attr.validator``)
+* adding ``create_dotfile`` for workflows, that creates graphs as dotfiles (can convert to other formats if dot available)
+* adding a simple user guide with ``input_spec`` description
+* expanding docstrings for ``State``, ``audit`` and ``messanger``
+* updating syntax to newer python
+
+0.7.0
+-----
+
+* refactoring the error handling by padra: improving raised errors, removing nodes from the workflow graph that can't be run
+* refactoring of the ``input_spec``: adapting better to the nipype interfaces
+* switching from ``pkg_resources.declare_namespace`` to the stdlib ``pkgutil.extend_path``
+* moving ``readme`` to rst format
+
+
+0.6.2
+-----
+
+* Use pkgutil to declare ``pydra.tasks`` as a namespace package, ensuring better support for
+  editable mode.
+
+0.6.1
+-----
+
+* Add ``pydra.tasks`` namespace package to enable separate packages of ``Task``\s to be
+  installed into ``pydra.tasks``.
+* Raise error when task or workflow name conflicts with names of attributes, methods, or
+  other tasks already added to workflow
+* Mention ``requirements.txt`` in README
+
+0.6
+---
+
+* removing the tutorial to a `separate repo <https://github.com/nipype/pydra-tutorial>`__
+* adding windows tests to codecov
+* accepting ``None`` as a valid output from a ``FunctionTask``, also for function that returns multiple values
+* fixing slurm error files
+* adding ``wf._connection`` to ``checksum``
+* allowing for updates of ``wf._connections``
+* editing output, so it works with ``numpy.arrays``
+* removing ``to_job`` and pickling task instead (workers read the tasks and set the proper input, so the multiple copies of the input are not kept in the memory)
+* adding standalone function ``load_and_run`` that can load and run a task from a pickle file
+* removing ``create_pyscript`` and simplifying the slurm worker
+* improving error reports in errors flies
+* fixing ``make_class`` so the ``Output`` is properly formatted
+
+0.5
+---
+
+* fixing ``hash_dir`` function
+* adding ``get_available_cpus`` to get the number of CPUs available to the current process or available on the system
+* adding simple implementation for ``BoshTask`` that uses boutiques descriptor
+* adding azure to CI
+* fixing code for windows
+* etelementry updates
+* adding more verbose output for task ``result`` - returns values or indices for input fields
+* adding an experimental implementation of Dask Worker (limited testing with ci)
+
+0.4
+---
+
+* reorganization of the ``State`` class, fixing small issues with the class
+* fixing some paths issues on windows os
+* adding osx and window sto the travis runs (right now allowing for failures for windows)
+* adding ``PydraStateError`` for exception in the ``State`` class
+* small fixes to the hashing functions, adding more tests
+* adding ``hash_dir`` to calculate hash for ``Directory`` type
+
+0.3.1
+-----
+
+* passing ``wf.cache_locations`` to the task
+* using ``rerun`` from submitter to all task
+* adding ``test_rerun`` and ``propagate_rerun`` for workflows
+* fixing task with a full combiner
+* adding ``cont_dim`` to specify dimensionality of the input variables (how much the input is nested)
+
+0.3
+---
+
+* adding sphinx documentation
+* moving from ``dataclasses`` to ``attrs``
+* adding ``container`` flag to the ``ShellCommandTask``
+* fixing ``cmdline``, ``command_args`` and ``container_args`` for tasks with states
+* adding ``CONTRIBUTING.md``
+* fixing hash calculations for inputs with a list of files
+* using ``attr.NOTHING`` for input that is not set
+
+0.2.2
+-----
+
+* supporting tuple as a single element of an input
+
+0.2.1
+-----
+
+* fixing: nodes with states and input fields (from splitter) that are empty were failing
+
+0.2
+---
+
+* big changes in ``ShellTask``, ``DockerTask`` and ``SingularityTask``
+    * customized input specification and output specification for ``Task``\s
+    * adding singularity checks to Travis CI
+    * binding all input files to the container
+* changes in ``Workflow``
+    * passing all outputs to the next node: ``lzout.all_``
+    * fixing inner splitter
+* allowing for ``splitter`` and ``combiner`` updates
+* adding ``etelementry`` support
+
+0.1
+---
+
+* Core dataflow creation and management API
+* Distributed workers:
+    * concurrent futures
+    * SLURM
+* Notebooks for Pydra concepts
+
+0.0.1
+-----
+
+Initial Pydra Dataflow Engine release.