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Pull requests: nextstrain/ncov
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Elevate lineage XDV.1 as clade 24D and lineage KP.3.1.1 as clade 23E
#1149
opened Aug 25, 2024 by
trvrb
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3 of 9 tasks
Allow build-specific --narrow-bandwidth param in frequencies
#1130
opened Jul 26, 2024 by
trvrb
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Demo prefilter rule for Nextstrain GISAID build
#1128
opened Jul 25, 2024 by
huddlej
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4 tasks
Document example accepted docker image formats for action
#1105
opened May 3, 2024 by
victorlin
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Allow specification of container image in workflow rebuild-100k.yml
#1067
opened May 5, 2023 by
corneliusroemer
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Soft-mask (just for topology) 486P site 23018
#1060
opened Apr 11, 2023 by
corneliusroemer
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4 tasks
Allow a list of sequence exclusion files, instead of just one
#977
opened Jul 11, 2022 by
sacundim
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Fix annotate metadata with numeric strains
#952
opened May 25, 2022 by
huddlej
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2 tasks done
Remove whitespace indents from large Auspice JSONs
#944
opened May 9, 2022 by
fanninpm
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4 tasks
Restrict 6m builds to tips in the last 6m (post-tree-building)
#934
opened Apr 28, 2022 by
jameshadfield
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Fill in more lat/long data from the OpenStreetMap name-to-location API
#920
opened Apr 15, 2022 by
jgadling
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Add parameter to enable overriding tree args
#871
opened Feb 16, 2022 by
huddlej
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4 of 5 tasks
Remove redundant include strains
bug
Something isn't working
#843
opened Jan 25, 2022 by
huddlej
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2 tasks done
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