Fails to open *.cif, *.CIF, *.MMCIF, *.mmCIF

[tinchogb]

Hi 👋🏼 , thanks for this amazing extension.

I was trying to open it from local files structures and...

Fails when I choose:

*.cif
*.CIF
*.MMCIF
*.mmCIF

but not with:

*.mmcif

Extension: Protein Viewer
Version: v0.0.8
OS: Ubuntu 22.04
Visual Studio Code:
Version: 1.72.2
Commit: d045a5eda657f4d7b676dedbfa7aab8207f8a075
Date: 2022-10-12T22:16:26.920Z
Electron: 19.0.17
Chromium: 102.0.5005.167
Node.js: 16.14.2
V8: 10.2.154.15-electron.0
OS: Linux x64 5.15.0-52-generic
Sandboxed: No

[MarcoVando]

Same here.
What type of commands are needed in cif files?
Some programs during structure solution/refinement usually export only atom positions and symmetry operations. Are these cif command sufficient?

[a-r-j]

Hmm, I was under the impression that I’d fixed this:

VSCoding-Sequence/package.json

Line 76 in ce7a1de

"when": "resourceExtname == .pdb || resourceExtname == .pdb.gz || resourceExtname == .PDB || resourceExtname == .mol2 || resourceExtname == .MOL2 || resourceExtname == .sdf || resourceExtname == .SDF || resourceExtname == .mmCIF || resourceExtname == .mmcif || resourceExtname == .cif.gz || resourceExtname == .MMCIF || resourceExtname == .Mol || resourceExtname == .mol || resourceExtname == .MOL || resourceExtname == .xyz || resourceExtname == .XYZ || resourceExtname == .ent || resourceExtname == .ENT || resourceExtname == .pdbqt || resourceExtname == .PDBQT || resourceExtname == .cif || resourceExtname == .CIF || resourceExtname == .mcif || resourceExtname == .MCIF || resourceExtname == .gro || resourceExtname == .GRO",

It also doesn’t work for me though. I’m not going to have bandwidth to work on this for the foreseeable future so I’m hoping someone would be able to pick this up. Happy to support.

On a second look, it could be this line needs to be updated:

VSCoding-Sequence/src/panels/ProteinViewerPanel.ts

Line 186 in ce7a1de

if (extension === 'cif' || extension === 'mmCIF' || extension === 'CIF' || extension === 'MMCIF' || extension == '.mCIF' || extension == '.mcif') {

[MarcoVando]

Same problem
What are the minimum needed commands that need to be in the .cif file? I use a software that generate very basic .cif files from refining process.