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Sync tests with openfl develop branch #772

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merged 6 commits into from
Jan 16, 2024
Merged

Sync tests with openfl develop branch #772

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8408134
sync tests with openfl-develop
scap3yvt Jan 16, 2024
125348e
using latest version
scap3yvt Jan 16, 2024
0f67d95
Update openfl-test.yml
scap3yvt Jan 16, 2024
0b6e8c6
added comment
scap3yvt Jan 16, 2024
ca4f44b
trying a different mechanism
scap3yvt Jan 16, 2024
6436fdd
fixed paths
scap3yvt Jan 16, 2024
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14 changes: 8 additions & 6 deletions .github/workflows/openfl-test.yml
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Expand Up @@ -90,13 +90,15 @@ jobs:
git clone https://github.com/securefederatedai/openfl.git
cd openfl
git fetch --tags
git checkout $(git describe --tags --abbrev=0)
echo "Checkout the latest OpenFL tag"
latestTag=$(git describe --tags "$(git rev-list --tags --max-count=1)")
git checkout $latestTag
sed -i -e 's/protobuf==3.19.6/protobuf/g' setup.py ## this should NOT be there
pip install -e .
cd ..
echo "Copying files to appropriate directories"
head -n 1 testing/data/train_3d_rad_segmentation.csv > /home/runner/work/GaNDLF/GaNDLF/openfl/seg_test_val.csv
tail -n +9 testing/data/train_3d_rad_segmentation.csv >> /home/runner/work/GaNDLF/GaNDLF/openfl/seg_test_val.csv
head -n 8 testing/data/train_3d_rad_segmentation.csv > /home/runner/work/GaNDLF/GaNDLF/openfl/seg_test_train.csv
echo "Copying files to appropriate directories and updated headers"
head -n 1 testing/data/train_3d_rad_segmentation.csv > /home/runner/work/GaNDLF/GaNDLF/openfl/valid.csv
tail -n +9 testing/data/train_3d_rad_segmentation.csv >> /home/runner/work/GaNDLF/GaNDLF/openfl/valid.csv
head -n 8 testing/data/train_3d_rad_segmentation.csv > /home/runner/work/GaNDLF/GaNDLF/openfl/train.csv
cd openfl
python -m tests.github.test_fets_challenge --template fets_challenge_seg_test --fed_workspace aggregator --col1 col1 --col2 col2 --rounds-to-train 1
python -m tests.github.test_gandlf --template gandlf_seg_test --fed_workspace aggregator --col1 one --col2 two --rounds-to-train 1
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