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  1. Linkage-Analysis Linkage-Analysis Public

    Pipeline and auxiliary scripts to run Linkage disequilibrium analysis in families using Merlin software.

    Jupyter Notebook 1

  2. ASMC ASMC Public

    Forked from PalamaraLab/ASMC

    Ascertained Sequentially Markovian Coalescent

    C++

  3. PopulationStructure PopulationStructure Public

    Pipeline including Quality Control and steps to run PCA and ADMIXTURE

    R

  4. Y-chromosome Y-chromosome Public

    Scripts from Y chromosome control quality and haplogroup inference

    Shell

  5. sdMAF sdMAF Public

    Forked from ZhongWang99/sdMAF

    Related codes with 'Major sex differences in allele frequencies for X chromosome variants in the 1000 Genomes Project data'

    HTML