Network schema io #44
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update network-schema-io with latest development branch,
Reading in the TN Spike file with new function. Added NeMo_TN.py file to build system - is a CLI application that will load TN JSON files and run NeMo with them.
saves the paresed spikes as csv
Was running into issues with memory limits and processing time, now uses threading, and basic JIT Includes some testing and sobel TN files for testing
Still need to write package for TN input and run.
Fixed the IO for spikes - reading files. Currently files are hardcoded as nemo_model.csv and nemo_spikes.csv. CSV does not look like it it loading in to neurons exactly right - need to double check that.
Fixed the IO for spikes - reading files. Currently files are hardcoded as nemo_model.csv and nemo_spikes.csv. CSV does not look like it it loading in to neurons exactly right - need to double check that.
Also re-wrote some of the output for nemo
Network schema io neil
Need to write Neuron init code as well as main function code and one cleanup function in read_model.c Also forked and added the Lua cmake project as a submodule. Submodule init/update is now required.
Added more descriptive file read error prompts.
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Reviewed 15 of 52 files at r1, 54 of 214 files at r3, 37 of 152 files at r5, 16 of 16 files at r6, 2 of 2 files at r7. Comments from Reviewable |
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This merge pushes the first potentially working IO subsystem into the development branch.
Current known issues include #43, and a very complex build process.
Further debugging/QA needs to be done before this is ready for release. Pulling due to new work with visualization.
This change is