neurodesk-on-arm

This project’s main goal is to test and run the NeuroDesk suite of medical imaging containers on ARM. For the purpose of testing, Advanced Normalization Tools (ANTs) was chosen. ANTs computes high-dimensional mappings to capture the statistics of brain structure and function.

Running NeuroDesk on ARM

Compiling ANTs natively on ARM

In order to compile ANTs natively on ARM, create a new ARM Ampere instance.

Source

workingDir=${PWD}
git clone https://github.com/ANTsX/ANTs.git
mkdir build install
cd build
cmake \
    -DCMAKE_INSTALL_PREFIX=${workingDir}/install \
    ../ANTs 2>&1 | tee cmake.log
make -j 4 2>&1 | tee build.log
cd ANTS-build
make install 2>&1 | tee install.log

DockerHub Image for ANTs on ARM

https://hub.docker.com/repository/docker/rkp1/ants-arm