al·pha·bet soup /ˈalfəˌbet so͞op/Submit noun INFORMAL incomprehensible or confusing language, typically containing many abbreviations or symbols.
alphabetsoup fixes problems with protein FASTA files: +--------------------------+------------------------+ | Problem | Fix | +--------------------------+------------------------+ | Unknown character | Replaces with 'X' | +--------------------------+------------------------+ | Stop/ambigous at ends | Trims | +--------------------------+------------------------+ | Stop/ambiguous in middle | Optionally fragments | +--------------------------+------------------------+ | Too short | Deletes record | +--------------------------+------------------------+
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