The document is based on the PhD Thesis template of the University of Oxford (source: https://www.sharelatex.com/templates/thesis/phd-thesis-of-university-of-oxford). To compile the files with TexMaker just use PdfLaTeX + Bib(la)tex + PdfLaTeX (x2)
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The code used for this thesis is available under MIT license at: https://github.com/jlobatop/GA-CFD-MO.
The way this repository will be organized is by keeping the version handed in at the University of Vermont in the master branch, creating a slightly modified and enhanced version for the University of Leon in other branch.