feat: add --exclude-after-remap option for users who pre-instrument their codebase

README.md

@@ -53,14 +53,14 @@ and a `text-lcov` coverage report.
 nyc --reporter=lcov --reporter=text-lcov npm test
 ```
 
-### Accurate stack traces using source maps
+### Accurate stack traces using source-maps
 
 When `produce-source-map` is set to true, then the instrumented source files will
 include inline source maps for the instrumenter transform. When combined with
 [source-map-support](https://github.com/evanw/node-source-map-support),
 stack traces for instrumented code will reflect their original lines.
 
-### Support for custom require hooks (babel, webpack, etc.)
+### Support for custom require hooks (babel, typescript, etc.)
 
 nyc supports custom require hooks like
 [`babel-register`](http://babeljs.io/docs/usage/require/). nyc can
@@ -69,9 +69,20 @@ flag](#require-additional-modules).
 
 Source maps are used to map coverage information back to the appropriate lines
 of the pre-transpiled code. You'll have to configure your custom require hook
-to inline the source map in the transpiled code. For Babel that means setting
+to inline the source-map in the transpiled code. For Babel that means setting
 the `sourceMaps` option to `inline`.
 
+### Source-Map support for pre-instrumented codebases
+
+If you opt to pre-instrument your source-code (rather than using a just-in-time
+transpiler like [`babel-register`](http://babeljs.io/docs/usage/require/))
+nyc supports both inline source-maps and `.map` files.
+
+_Important: If you are using nyc with a project that pre-instruments its code,
+run nyc with the configuration option `--exclude-after-remap` set to `false`.
+Otherwise nyc's reports will exclude any files that source-maps remap to folders
+covered under exclude rules._
+
 ## Use with `babel-plugin-istanbul` for Babel Support
 
 We recommend using [`babel-plugin-istanbul`](https://github.com/istanbuljs/babel-plugin-istanbul) if your
@@ -118,20 +129,20 @@ That's all there is to it, better ES2015+ syntax highlighting awaits:
 
 <img width="500" src="screen2.png">
 
-## Support for alternate file extensions (.jsx, .es6)
+## Support for alternate file extensions (.jsx, .mjs)
 
 Supporting file extensions can be configured through either the configuration arguments or with the `nyc` config section in `package.json`.
 
 ```shell
-nyc --extension .jsx --extension .es6 npm test
+nyc --extension .jsx --extension .mjs npm test
 ```
 
 ```json
 {
   "nyc": {
     "extension": [
       ".jsx",
-      ".es6"
+      ".mjs"
     ]
   }
 }
@@ -320,9 +331,18 @@ You can specify custom high and low watermarks in nyc's configuration:
 }
 ```
 
-## Other advanced features
+## Parsing Hints (Ignoring Lines)
 
-Take a look at http://istanbul.js.org/docs/advanced/ and please feel free to [contribute documentation](https://github.com/istanbuljs/istanbuljs.github.io/tree/development/content).
+There may be some sections of your codebase that you wish to purposefully
+exclude from coverage tracking, to do so you can use the following parsing
+hints:
+
+* `/* istanbul ignore if */`: ignore the next if statement.
+* `/* istanbul ignore else */`: ignore the else portion of an if statement.
+* `/* istanbul ignore next */`: ignore the next _thing_ in the source-code (
+ functions, if statements, classes, you name it).
+* `/* istanbul ignore file */`: ignore an entire source-file (this should be
+  placed at the top of the file).
 
 ## Integrating with coveralls
 
@@ -396,8 +416,13 @@ Here's how to get `nyc` integrated with codecov and travis-ci.org:
 That's all there is to it!
 
 ## Integrating with TAP formatters
+
 Many testing frameworks (Mocha, Tape, Tap, etc.) can produce [TAP](https://en.wikipedia.org/wiki/Test_Anything_Protocol) output. [tap-nyc](https://github.com/MegaArman/tap-nyc) is a TAP formatter designed to look nice with nyc.
 
 ## More tutorials
 
 You can find more tutorials at http://istanbul.js.org/docs/tutorials
+
+## Other advanced features
+
+Take a look at http://istanbul.js.org/docs/advanced/ and please feel free to [contribute documentation](https://github.com/istanbuljs/istanbuljs.github.io/tree/development/content).

index.js

@@ -420,9 +420,15 @@ NYC.prototype._getCoverageMapFromAllCoverageFiles = function () {
   this.loadReports().forEach(function (report) {
     map.merge(report)
   })
-  map.filter(function (filename) {
-    return _this.exclude.shouldInstrument(filename)
-  })
+  // depending on whether source-code is pre-instrumented
+  // or instrumented using a JIT plugin like babel-require
+  // you may opt to exclude files after applying
+  // source-map remapping logic.
+  if (this.config.excludeAfterRemap) {
+    map.filter(function (filename) {
+      return _this.exclude.shouldInstrument(filename)
+    })
+  }
   map.data = this.sourceMaps.remapCoverage(map.data)
   return map
 }

lib/config-util.js

@@ -75,6 +75,12 @@ Config.buildYargs = function (cwd) {
       describe: 'a list of specific files and directories that should be excluded from coverage, glob patterns are supported, node_modules is always excluded',
       global: false
     })
+    .option('exclude-after-remap', {
+      default: true,
+      type: 'boolean',
+      description: 'should exclude logic be performed after the source-map remaps filenames?',
+      global: false
+    })
     .option('include', {
       alias: 'n',
       default: [],

package.json

@@ -96,7 +96,7 @@
     "resolve-from": "^2.0.0",
     "rimraf": "^2.5.4",
     "signal-exit": "^3.0.1",
-    "spawn-wrap": "^1.4.0",
+    "spawn-wrap": "1.3.8",
     "test-exclude": "^4.1.1",
     "yargs": "^10.0.3",
     "yargs-parser": "^8.0.0"
@@ -119,6 +119,7 @@
     "split-lines": "^1.0.0",
     "standard": "^9.0.2",
     "standard-version": "^4.0.0",
+    "strip-indent": "^2.0.0",
     "tap": "^10.0.0",
     "which": "^1.2.11",
     "zero-fill": "^2.2.3"

test/fixtures/source-maps/original/s1.js

@@ -0,0 +1,9 @@
+var apple = 99
+var banana = 200
+function add (item1, item2) {
+  return item1 + item2
+}
+function multiply (item1, item2) {
+  return item1 * item2
+}
+add(apple, banana)

test/fixtures/source-maps/original/s2.js

@@ -0,0 +1,6 @@
+var strawberry = 99
+var pineapple = 200
+function add (item1, item2) {
+  return item1 + item2
+}
+add(strawberry, pineapple)

test/fixtures/source-maps/package.json

@@ -0,0 +1 @@
+{}

test/nyc-bin.js

@@ -1,16 +1,18 @@
 /* global describe, it */
 
-var _ = require('lodash')
-var path = require('path')
-var bin = path.resolve(__dirname, '../bin/nyc')
-var fixturesCLI = path.resolve(__dirname, './fixtures/cli')
-var fakebin = path.resolve(fixturesCLI, 'fakebin')
-var fixturesHooks = path.resolve(__dirname, './fixtures/hooks')
-var fs = require('fs')
-var glob = require('glob')
-var isWindows = require('is-windows')()
-var rimraf = require('rimraf')
-var spawn = require('child_process').spawn
+const _ = require('lodash')
+const path = require('path')
+const bin = path.resolve(__dirname, '../bin/nyc')
+const fixturesCLI = path.resolve(__dirname, './fixtures/cli')
+const fixturesHooks = path.resolve(__dirname, './fixtures/hooks')
+const fixturesSourceMaps = path.resolve(__dirname, './fixtures/source-maps')
+const fakebin = path.resolve(fixturesCLI, 'fakebin')
+const fs = require('fs')
+const glob = require('glob')
+const isWindows = require('is-windows')()
+const rimraf = require('rimraf')
+const spawn = require('child_process').spawn
+const si = require('strip-indent')
 
 require('chai').should()
 
@@ -762,4 +764,120 @@ describe('the nyc cli', function () {
       done()
     })
   })
+
+  // the following tests exercise nyc's behavior around source-maps
+  // that have been included with pre-instrumented files. Perhaps, as an
+  // example, unit tests are being run against minified JavaScript.
+  // --exclude-after-remap will likely need to be set to false when
+  // using nyc with this type of configuration.
+  describe('source-maps', () => {
+    describe('--all', () => {
+      it('includes files with both .map files and inline source-maps', (done) => {
+        const args = [
+          bin,
+          '--all',
+          '--cache', 'false',
+          '--exclude-after-remap', 'false',
+          '--exclude', 'original',
+          process.execPath, './instrumented/s1.min.js'
+        ]
+
+        const proc = spawn(process.execPath, args, {
+          cwd: fixturesSourceMaps,
+          env: env
+        })
+
+        var stdout = ''
+        proc.stdout.on('data', function (chunk) {
+          stdout += chunk
+        })
+
+        proc.on('close', function (code) {
+          code.should.equal(0)
+          stdoutShouldEqual(stdout, `
+            ----------|----------|----------|----------|----------|----------------|
+            File      |  % Stmts | % Branch |  % Funcs |  % Lines |Uncovered Lines |
+            ----------|----------|----------|----------|----------|----------------|
+            All files |    44.44 |      100 |    33.33 |    44.44 |                |
+             s1.js    |       80 |      100 |       50 |       80 |              7 |
+             s2.js    |        0 |      100 |        0 |        0 |        1,2,4,6 |
+            ----------|----------|----------|----------|----------|----------------|`
+          )
+          done()
+        })
+      })
+    })
+
+    describe('.map file', () => {
+      it('appropriately instruments file with corresponding .map file', (done) => {
+        const args = [
+          bin,
+          '--cache', 'false',
+          '--exclude-after-remap', 'false',
+          '--exclude', 'original',
+          process.execPath, './instrumented/s1.min.js'
+        ]
+
+        const proc = spawn(process.execPath, args, {
+          cwd: fixturesSourceMaps,
+          env: env
+        })
+
+        var stdout = ''
+        proc.stdout.on('data', function (chunk) {
+          stdout += chunk
+        })
+
+        proc.on('close', function (code) {
+          code.should.equal(0)
+          stdoutShouldEqual(stdout, `
+          ----------|----------|----------|----------|----------|----------------|
+          File      |  % Stmts | % Branch |  % Funcs |  % Lines |Uncovered Lines |
+          ----------|----------|----------|----------|----------|----------------|
+          All files |       80 |      100 |       50 |       80 |                |
+           s1.js    |       80 |      100 |       50 |       80 |              7 |
+          ----------|----------|----------|----------|----------|----------------|`)
+          done()
+        })
+      })
+    })
+
+    describe('inline', () => {
+      it('appropriately instruments a file with an inline source-map', (done) => {
+        const args = [
+          bin,
+          '--cache', 'false',
+          '--exclude-after-remap', 'false',
+          '--exclude', 'original',
+          process.execPath, './instrumented/s2.min.js'
+        ]
+
+        const proc = spawn(process.execPath, args, {
+          cwd: fixturesSourceMaps,
+          env: env
+        })
+
+        var stdout = ''
+        proc.stdout.on('data', function (chunk) {
+          stdout += chunk
+        })
+
+        proc.on('close', function (code) {
+          code.should.equal(0)
+          stdoutShouldEqual(stdout, `
+            ----------|----------|----------|----------|----------|----------------|
+            File      |  % Stmts | % Branch |  % Funcs |  % Lines |Uncovered Lines |
+            ----------|----------|----------|----------|----------|----------------|
+            All files |      100 |      100 |      100 |      100 |                |
+             s2.js    |      100 |      100 |      100 |      100 |                |
+            ----------|----------|----------|----------|----------|----------------|`)
+          done()
+        })
+      })
+    })
+  })
 })
+
+function stdoutShouldEqual (stdout, expected) {
+  `\n${stdout}`.should.equal(`${si(expected)}\n`)
+}