Updated new version of vcf simplify.

Features of this release:

1. Removed any external python dependencies.
2. Refactored and optimized code.
3. Add optional cython feature for faster computation

VCF-Simplify-v2.2

Updated new commits.

VCF-Simplify-v2.1

A new "VCF-Simplify" with capabilities to:

• Convert a VCF file to Table output:

  • convert VCF to most simple output while decompresses INFO, FORMAT field of all the SAMPLE.
  • This tools also provides more controlled workflow to only extract desired INFO tags, FORMAT tags for only desired samples of interest.

• Convert the TABLE to VCF file

• Convert VCF to Haplotype file (to be used in phase-Extender and phase-Stitcher)

• Convert Haplotype file to VCF.

VCF-Simplify2.0

A new "VCF-Simplify" with capabilities to:

• Convert a VCF file to Table output:
  • convert VCF to most simple output while decompresses INFO, FORMAT field of all the SAMPLE.
  • This tools also provides more controlled workflow to only extract desired INFO tags, FORMAT tags for only desired samples of interest.