Sub-compartments (#84)

[Quantalabs]

Checklist:

• Title is meaningful
• Followed Contributing Guidelines
• No new issues, pre-existing issues in the repo are okay. We just don't want faulty code to be published to the nightly build or main if it can be prevented
• All new dependencies are added to [package.json]

Overview

Adds sub compartment functionality to EpiJS. This brings breaking changes, and will be shipped with v3, after #115 and #83 are implemented, along with other functionality.

File Changelist

• EpiJS/comp.js
  • Add sub-compartments with .addSub method for all compartments.
  • Get sub-compartment populations with .getSubData method for all compartments.
• EpiJS/model.js
  • Change .get_data method to include sub-compartment data if it exists.
• tests/scripts/com.js
  • Update community modelling testing to include sub-compartments
• tests/scripts/comp.js
  • Add testing for sub-compartments with the comp module
• tests/scripts/model.js
  • Update testing to include sub-compartments with model module
• web/index.min.js
  • Rebuild code with updates to the comp and model modules.

Other Notes

Important: This PR brings breaking changes which, though minor, can cause errors in your code. We highly encourage you check out these changes before running code with this again.

Closes #84

[quantum9Innovation]

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