This resource processes the evolutionary rate covaration (ERC) data from Priedigkeit et al 2015. ERC assesses whether two genes have a similar evolutionary history. See the corresponding Thinklab discussion for more information.
erc.ipynb
converts the raw ERC data into a tidy TSV (erc_mam33.tsv.gz
) containing each gene pair mapped to Entrez Gene. entrez-group.R
converts to using Entrez Gene as the primary gene identifiers. erc_mam33-entrez.tsv.gz
is not tracked, since it's 821 MB, but the subset of gene pairs with ERC values >= 0.6 is stored in erc_mam33-entrez-gt-0.6.tsv.gz
.
All original content in this repository is licensed under CC0 1.0. ERC data is used with permission.