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Merge branch 'main' of https://github.com/cmatKhan/llfsRnaseq into main
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fixing typo in README
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cmatKhan committed Jul 17, 2023
2 parents 97cf85c + 55dc873 commit 916338e
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Expand Up @@ -36,7 +36,7 @@ to use the DESeqDataSet object. DESeqDataSet objects inherit from the base
bioconductor object
[SummarizedExperiment](https://www.bioconductor.org/packages/devel/bioc/vignettes/SummarizedExperiment/inst/doc/SummarizedExperiment.html).
And, SummarizedExperiment is a core component of Bioconductor's
[Scalable Genomcis Toolset](https://pubmed.ncbi.nlm.nih.gov/28018047/). Namely,
[Scalable Genomics Toolset](https://pubmed.ncbi.nlm.nih.gov/28018047/). Namely,
in the `dds` object, there are 3 data attributes: the `rowRages`, which store
the gencode v38 gene level gtf annotations as [GRanges](https://bioconductor.org/packages/release/bioc/vignettes/GenomicRanges/inst/doc/GenomicRangesIntroduction.html),
and you can access row (gene) and column (sample) information, each of which are
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