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v0.22
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@holtgrewe holtgrewe released this 08 May 15:46
· 447 commits to main since this release
v0.22
00f5bb0

As in all recent releases, Jannovar is best installed through Maven Central.
Alternatively you can directly download the compiled jannovar-cli-0.22.jar.

jannovar-htsjdk

  • Fixin NPE problem with inheritance annotation

jannovar-statistics

  • Also counting number of variants on contigs
  • Fixing counting bug that made UTR3 variants be counted as UTR5
  • Fixing NPE in case of null variant annotations (e.g., unknown contig)

jannovar-vardbs

  • Fixing a problem with normalization on variant annotation
  • Fixing problem with default value of CLNSIG ("25" -> "255")

jannovar-filter

  • Incorporating gnomAD annotation into exclusion by frequency for inheritance filter (#343)
  • Fixing header description for MinAafHomAlt and MaxAafHomRef (#342)

jannovar-cli

  • Checking that reference is given also for gnomAD VCF annotation
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