Skip to content

High-throughput analysis of targeted microsatellite sequences.

Notifications You must be signed in to change notification settings

beiko-lab/MEGASAT

Repository files navigation

MEGASAT

MEGASAT is a software tool that can automatically infer genotypes from high-throughput microsatellite sequences. MEGASAT is written in Perl & R and includes a simple graphical user interface for Windows and Mac OS X systems.

Installation

Download the whole compressed zip file or just the folder that contains the scripts for your operating system.

If you want to test MEGASAT, you can also download "Megasat_data" that contains FASTQ files for estimating the genotyping error rate and "primer-input.txt" (a text file that contains information of PCR primers, flanking regions and repeated motifs for all the loci).

How to run MEGASAT

The documentation of MEGASAT is the file "MEGASAT Documentation.pdf".

About

High-throughput analysis of targeted microsatellite sequences.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published