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Handle Windows long file names in a few more places. (#1382)
Go can handle long file names on Windows if they are not relative. This change makes some file paths absolute so that go can handle them. See https://github.com/golang/go/blob/b86e76681366447798c94abb959bb60875bcc856/src/os/path_windows.go#L133. The protoc binary cannot handle long filenames either, so this change generates go protos in the temporary folder and then moves the contents into place.
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