Merge branch 'v3' into v3 #54
Workflow file for this run
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| name: pytest | |
| on: | |
| pull_request: | |
| push: | |
| branches: [v3] | |
| jobs: | |
| pytest: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-18.04] | |
| floatx: [float32, float64] | |
| test-subset: | |
| - | | |
| --ignore=pymc3/tests/test_backports.py | |
| --ignore=pymc3/tests/test_dist_math.py | |
| --ignore=pymc3/tests/test_distribution_defaults.py | |
| --ignore=pymc3/tests/test_distributions.py | |
| --ignore=pymc3/tests/test_distributions_random.py | |
| --ignore=pymc3/tests/test_distributions_timeseries.py | |
| --ignore=pymc3/tests/test_examples.py | |
| --ignore=pymc3/tests/test_gp.py | |
| --ignore=pymc3/tests/test_mixture.py | |
| --ignore=pymc3/tests/test_ode.py | |
| --ignore=pymc3/tests/test_parallel_sampling.py | |
| --ignore=pymc3/tests/test_posteriors.py | |
| --ignore=pymc3/tests/test_quadpotential.py | |
| --ignore=pymc3/tests/test_random.py | |
| --ignore=pymc3/tests/test_sampling.py | |
| --ignore=pymc3/tests/test_shape_handling.py | |
| --ignore=pymc3/tests/test_shared.py | |
| --ignore=pymc3/tests/test_smc.py | |
| --ignore=pymc3/tests/test_step.py | |
| --ignore=pymc3/tests/test_updates.py | |
| --ignore=pymc3/tests/test_variational_inference.py | |
| - | | |
| pymc3/tests/test_dist_math.py | |
| pymc3/tests/test_distribution_defaults.py | |
| pymc3/tests/test_distributions_random.py | |
| pymc3/tests/test_parallel_sampling.py | |
| pymc3/tests/test_random.py | |
| pymc3/tests/test_shared.py | |
| pymc3/tests/test_smc.py | |
| - | | |
| pymc3/tests/test_backports.py | |
| pymc3/tests/test_examples.py | |
| pymc3/tests/test_mixture.py | |
| pymc3/tests/test_ode.py | |
| pymc3/tests/test_posteriors.py | |
| pymc3/tests/test_quadpotential.py | |
| - | | |
| pymc3/tests/test_distributions_timeseries.py | |
| pymc3/tests/test_shape_handling.py | |
| pymc3/tests/test_step.py | |
| pymc3/tests/test_updates.py | |
| pymc3/tests/test_variational_inference.py | |
| - | | |
| pymc3/tests/test_distributions.py | |
| pymc3/tests/test_gp.py | |
| pymc3/tests/test_sampling.py | |
| fail-fast: false | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| TEST_SUBSET: ${{ matrix.test-subset }} | |
| THEANO_FLAGS: floatX=${{ matrix.floatx }},gcc__cxxflags='-march=native' | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Cache conda | |
| uses: actions/cache@v1 | |
| env: | |
| # Increase this value to reset cache if environment-dev-py37.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ | |
| hashFiles('conda-envs/environment-dev-py37.yml') }} | |
| - name: Cache multiple paths | |
| uses: actions/cache@v2 | |
| env: | |
| # Increase this value to reset cache if requirements.txt has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: | | |
| ~/.cache/pip | |
| $RUNNER_TOOL_CACHE/Python/* | |
| ~\AppData\Local\pip\Cache | |
| key: ${{ runner.os }}-build-${{ matrix.python-version }}-${{ | |
| hashFiles('requirements.txt') }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: pymc3-dev-py37 | |
| channel-priority: strict | |
| environment-file: conda-envs/environment-dev-py37.yml | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| - name: Install-pymc3 | |
| run: | | |
| conda activate pymc3-dev-py37 | |
| pip install -e . | |
| python --version | |
| - name: Run tests | |
| run: | | |
| conda activate pymc3-dev-py37 | |
| python -m pytest -vv --cov=pymc3 --cov-report=xml --cov-report term --durations=50 $TEST_SUBSET | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v1 | |
| with: | |
| env_vars: OS,PYTHON | |
| name: codecov-umbrella | |
| fail_ci_if_error: false |